RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 EPHA5P54756 1037 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 YWHAZP63104 245 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 GUCY2DQ02846 1103 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 CLUL1Q15846 466 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 MGAT5BQ3V5L5 792 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 OR6B2Q6IFH4 312 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 DCUN1D2Q6PH85 259 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 LRRC31Q6UY01 552 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 PSTKQ8IV42 348 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 LRRC57Q8N9N7 239 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 ATAD1Q8NBU5 361 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 SLITRK1Q96PX8 696 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 DDX23Q9BUQ8 820 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 NSUN3Q9H649 340 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 PRDM16Q9HAZ2 1276 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 POPDC2Q9HBU9 364 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 YIPF1Q9Y548 306 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 ZNF638Q14966 1978 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 SLC38A8A6NNN8 435 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 TMCO5BA8MYB1 307 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 MIF4GDA9UHW6 222 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 ADAM12O43184 909 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 ARHGEF15O94989 841 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 HOXB8P17481 243 aaPredicted RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 WEE1P30291 646 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 PCK1P35558 622 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 MATKP42679 507 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 NOP2P46087 812 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 SLC5A3P53794 718 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 MSANTD2Q6P1R3 559 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 STRADAQ7RTN6 431 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 SRLQ86TD4 932 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 VSIG1Q86XK7 387 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 CENPIQ92674 756 aaPredicted RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 PBKQ96KB5 322 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 KCNK16Q96T55 309 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 LPIN3Q9BQK8 851 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 ZNF576Q9H609 170 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 CYP4F11Q9HBI6 524 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 EPB41L5Q9HCM4 733 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 TLR8Q9NR97 1041 aaKnown RBP9.92□□□□□ -0.82
C11orf54-201ENST00000331239 STAP1Q9ULZ2 295 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 NFU1Q9UMS0 254 aa9.92□□□□□ -0.82
C11orf54-201ENST00000331239 ESYT3A0FGR9 886 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 C2CD4BA6NLJ0 364 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 C2CD2LO14523 706 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 BEST1O76090 585 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 PROSCO94903 275 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 CALCAP01258 141 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 LRG1P02750 347 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 CARSP49589 748 aaKnown RBP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ARPP19P56211 112 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ADIGQ0VDE8 80 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 KCNC3Q14003 757 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 COL19A1Q14993 1142 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 PLPP4Q5VZY2 271 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 FAM183BPQ6ZVS7 135 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 SCN4BQ8IWT1 228 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 EFHBQ8N7U6 833 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 STKLD1Q8NE28 680 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 TSPYL1Q9H0U9 437 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 TLE6Q9H808 572 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 CLGNO14967 610 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 GABBR2O75899 941 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 SEC24AO95486 1093 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 LTFP02788 710 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 RALAP11233 206 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ABCB4P21439 1286 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 GPD1P21695 349 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 CDC25CP30307 473 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 GBP1P32455 592 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 SLC25A52Q3SY17 297 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 FOXR1Q6PIV2 292 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 BNIPLQ7Z465 357 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 POLNQ7Z5Q5 900 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 MREGQ8N565 214 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 CASKIN2Q8WXE0 1202 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 IFT81Q8WYA0 676 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ARNTL2Q8WYA1 636 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.829e-10■■■■□ 24.3
C11orf54-201ENST00000331239 ZNF512Q96ME7 567 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 TBCBQ99426 244 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 SEPT5Q99719 369 aaPredicted RBP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ULBP1Q9BZM6 244 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 GOLPH3Q9H4A6 298 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 RETREG1Q9H6L5 497 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 RRP15Q9Y3B9 282 aaKnown RBP9.91□□□□□ -0.82
C11orf54-201ENST00000331239 ATG2AQ2TAZ0 1938 aa9.91□□□□□ -0.82
C11orf54-201ENST00000331239 HIDE1A8MVS5 230 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 ZNF487B1APH4 448 aa9.9□□□□□ -0.82
C11orf54-201ENST00000331239 PGRMC1O00264 195 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms