RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 APOL1O14791 398 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 MAP3K6O95382 1288 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CSH1P0DML2 217 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CSH2P0DML3 217 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 ASPAP45381 313 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CDH8P55286 799 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 OR6B2Q6IFH4 312 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 UNC5AQ6ZN44 842 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 ACAD11Q709F0 780 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 MARK2Q7KZI7 788 aaKnown RBP15.13■□□□□ 0.01
SSBP3-201ENST00000326956 ZBTB8OSQ8IWT0 167 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 GSDMBQ8TAX9 411 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 PIWIL2Q8TC59 973 aaKnown RBP15.13■□□□□ 0.01
SSBP3-201ENST00000326956 SIKE1Q9BRV8 207 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CNPY3Q9BT09 278 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 ETNK2Q9NVF9 386 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 SPATA31C2B4DYI2 1134 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 GPD1P21695 349 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 SLC4A11Q8NBS3 891 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 FAM172AQ8WUF8 416 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 WNK4Q96J92 1243 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 RNF157Q96PX1 679 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 KLHL4Q9C0H6 718 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 MKS1Q9NXB0 559 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 SDR42E2A6NKP2 422 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 TTLL13PA6NNM8 815 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 SNNO75324 88 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 ATG7O95352 703 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 AOC1P19801 751 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 SH3BGRP55822 239 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 CASC4Q6P4E1 433 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 PRPF31Q8WWY3 499 aaKnown RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 MAFBQ9Y5Q3 323 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 A0A088AWK7 358 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 SLC15A5A6NIM6 579 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 PIK3R2O00459 728 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 PLSCR1O15162 318 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 RNASEH1O60930 286 aaKnown RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 DESP17661 470 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 ZNF143P52747 638 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 RPL10AP62906 217 aaKnown RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 MMEL1Q495T6 779 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 ARHGAP22Q7Z5H3 698 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 ADGRG6Q86SQ4 1221 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 CAND1Q86VP6 1230 aaKnown RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 RXFP2Q8WXD0 754 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 DTNBP1Q96EV8 351 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 C20orf27Q9GZN8 174 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 SDCBP2Q9H190 292 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 USP29Q9HBJ7 922 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
SSBP3-201ENST00000326956 SMYD2Q9NRG4 433 aa15.12■□□□□ 0.01
SSBP3-201ENST00000326956 ARID2Q68CP9 1835 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PRKCBP05771 671 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 NCF2P19878 526 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PDE1BQ01064 536 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PTPN11Q06124 597 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 TRIP10Q15642 601 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 LRRC23Q53EV4 343 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 JADE3Q92613 823 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PEBP4Q96S96 227 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 GMLQ99445 158 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 SHCBP1LQ9BZQ2 653 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 FAM96AQ9H5X1 160 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 KIAA1217Q5T5P2 1943 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 WDR81Q562E7 1941 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 LYPLA1O75608 230 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 GRAP2O75791 330 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PDE5AO76074 875 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 MICAL2O94851 1124 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 HMGCRP04035 888 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PROCP04070 461 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 SLC1A6P48664 564 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 STXBP2Q15833 593 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 C15orf59Q2T9L4 293 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 SH3PXD2AQ5TCZ1 1133 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 CES4AQ5XG92 561 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 LPCAT4Q643R3 524 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 C16orf46Q6P387 395 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 TRMT10BQ6PF06 316 aaKnown RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 DENND5BQ6ZUT9 1274 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 PLD5Q8N7P1 536 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 ZNF526Q8TF50 670 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 GDPD5Q8WTR4 605 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 HEXIM2Q96MH2 286 aaKnown RBP15.11■□□□□ 0.01
SSBP3-201ENST00000326956 GPATCH2LQ9NWQ4 482 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 SLC4A7Q9Y6M7 1214 aa15.11■□□□□ 0.01
SSBP3-201ENST00000326956 TGM2P21980 687 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 MAP7Q14244 749 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 PDK2Q15119 407 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 GRAMD1BQ3KR37 738 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 RALGPS1Q5JS13 557 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 MAP3K21Q5TCX8 1036 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 PDSS2Q86YH6 399 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 RNF149Q8NC42 400 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 UBA3Q8TBC4 463 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 CDKL2Q92772 493 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 KCNN1Q92952 543 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 MCRS1Q96EZ8 462 aa15.1■□□□□ 0.01
SSBP3-201ENST00000326956 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms