RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 FAM71DQ8N9W8 422 aa20.06■□□□□ 0.8
CHMP6-201ENST00000325167 PCDH19Q8TAB3 1148 aa20.06■□□□□ 0.8
CHMP6-201ENST00000325167 UHMK1Q8TAS1 419 aaKnown RBP20.06■□□□□ 0.8
CHMP6-201ENST00000325167 DHX35Q9H5Z1 703 aaKnown RBP20.06■□□□□ 0.8
CHMP6-201ENST00000325167 SMIM23A6NLE4 172 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 C9IYK1 514 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 E7EVH7 732 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 M0QZQ0 153 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 MGEA5O60502 916 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 B3GAT3O94766 335 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 ZBED1O96006 694 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 TKTL1P51854 596 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 SKIDA1Q1XH10 827 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 TIGD5Q53EQ6 642 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 PPP6R3Q5H9R7 873 aaPredicted RBP20.05■□□□□ 0.8
CHMP6-201ENST00000325167 SPATS2Q86XZ4 545 aaKnown RBP20.05■□□□□ 0.8
CHMP6-201ENST00000325167 TDRPQ86YL5 185 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 PDIK1LQ8N165 341 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 THEM5Q8N1Q8 247 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 IRGQQ8WZA9 623 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 CPT1BQ92523 772 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 NPY6RQ99463 290 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 TMEM106CQ9BVX2 250 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 RGS18Q9NS28 235 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 TRMT13Q9NUP7 481 aaKnown RBP20.05■□□□□ 0.8
CHMP6-201ENST00000325167 FETUBQ9UGM5 382 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 ACTL7BQ9Y614 415 aa20.05■□□□□ 0.8
CHMP6-201ENST00000325167 CLDN5O00501 218 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 CHADO15335 359 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 ATP2A2P16615 1042 aaKnown RBP20.04■□□□□ 0.8
CHMP6-201ENST00000325167 TYMPP19971 482 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 ZNF135P52742 658 aaPredicted RBP20.04■□□□□ 0.8
CHMP6-201ENST00000325167 GDF10P55107 478 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 HNRNPH2P55795 449 aaKnown RBP20.04■□□□□ 0.8
CHMP6-201ENST00000325167 MAP3K7CLP57077 242 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 RASA2Q15283 850 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 RAB41Q5JT25 222 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 C1orf228Q6PIY5 440 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 BNIPLQ7Z465 357 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 ZNF598Q86UK7 904 aaKnown RBP20.04■□□□□ 0.8
CHMP6-201ENST00000325167 SCML4Q8N228 414 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 SLAIN1Q8ND83 568 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 PCED1BQ96HM7 432 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 C9orf72Q96LT7 481 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 FERMT1Q9BQL6 677 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 PNPLA8Q9NP80 782 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 DNAJC17Q9NVM6 304 aaKnown RBP20.04■□□□□ 0.8
CHMP6-201ENST00000325167 GPATCH2LQ9NWQ4 482 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 FZD10Q9ULW2 581 aa20.04■□□□□ 0.8
CHMP6-201ENST00000325167 HACD1B0YJ81 288 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 E7ESA3 106 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 H3BRJ5 948 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 NDUFAB1O14561 156 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 RNASELQ05823 741 aaKnown RBP20.03■□□□□ 0.8
CHMP6-201ENST00000325167 LONRF1Q17RB8 773 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 RAB6CQ53S08 254 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 DCAF6Q58WW2 860 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 KIAA0319Q5VV43 1072 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 GLB1LQ6UWU2 654 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 ZC3H18Q86VM9 953 aaKnown RBP20.03■□□□□ 0.8
CHMP6-201ENST00000325167 ATP11CQ8NB49 1132 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 SLC43A3Q8NBI5 491 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 C3orf58Q8NDZ4 430 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 RAB6CQ9H0N0 254 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 CSNK1G1Q9HCP0 422 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 TMEM51Q9NW97 253 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 SF3B1O75533 1304 aaKnown RBP eCLIP20.03■□□□□ 0.8
CHMP6-201ENST00000325167 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 CAPN9O14815 690 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 COL6A1P12109 1028 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 CKBP12277 381 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 SLCO1A2P46721 670 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 DAOAP59103 153 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 PDIA2Q13087 525 aaKnown RBP20.03■□□□□ 0.8
CHMP6-201ENST00000325167 CA9Q16790 459 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 INTS6LQ5JSJ4 861 aaKnown RBP20.03■□□□□ 0.8
CHMP6-201ENST00000325167 FAM171BQ6P995 826 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 NPNTQ6UXI9 565 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 SLC24A5Q71RS6 500 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 B4GALNT4Q76KP1 1039 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 URGCPQ8TCY9 931 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 NTAN1Q96AB6 310 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 SUSD3Q96L08 255 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 CSPG4P5Q96PW8 444 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 SELENOSQ9BQE4 189 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 FTHL17Q9BXU8 183 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 KLC2Q9H0B6 622 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 HMX1Q9NP08 348 aaPredicted RBP20.03■□□□□ 0.8
CHMP6-201ENST00000325167 KANSL3Q9P2N6 904 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 HEY1Q9Y5J3 304 aa20.03■□□□□ 0.8
CHMP6-201ENST00000325167 MYBPHLA2RUH7 354 aa20.02■□□□□ 0.8
CHMP6-201ENST00000325167 GMNCA6NCL1 334 aa20.02■□□□□ 0.8
CHMP6-201ENST00000325167 F9P00740 461 aa20.02■□□□□ 0.8
CHMP6-201ENST00000325167 POMCP01189 267 aa20.02■□□□□ 0.8
CHMP6-201ENST00000325167 AFF1P51825 1210 aaKnown RBP20.02■□□□□ 0.8
CHMP6-201ENST00000325167 BASP1P80723 227 aaKnown RBP20.02■□□□□ 0.8
CHMP6-201ENST00000325167 TSPY1Q01534 308 aa20.02■□□□□ 0.8
CHMP6-201ENST00000325167 DEUP1Q05D60 604 aa20.02■□□□□ 0.8
CHMP6-201ENST00000325167 MTFR1Q15390 333 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms