RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 HSD17B3P37058 310 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 DHX9Q08211 1270 aaKnown RBP19.18■□□□□ 0.66
USP39-201ENST00000323701 DPYSL2Q16555 572 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 PM20D1Q6GTS8 502 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 FUT10Q6P4F1 479 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 ALLCQ8N6M5 410 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 ATAD1Q8NBU5 361 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 FAM71BQ8TC56 605 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 GRK7Q8WTQ7 553 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 PWWP2AQ96N64 755 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 ZIM3Q96PE6 472 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 MFHAS1Q9Y4C4 1052 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 USP3Q9Y6I4 520 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 ZNF638Q14966 1978 aaKnown RBP19.18■□□□□ 0.66
USP39-201ENST00000323701 ARHGEF37A1IGU5 675 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 SYN3O14994 580 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 GAS8O95995 478 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 KRT14P02533 472 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 FGFR3P22607 806 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 GRIK1P39086 918 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 MAPRE1Q15691 268 aaKnown RBP19.17■□□□□ 0.66
USP39-201ENST00000323701 DDR2Q16832 855 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 CTXN3Q4LDR2 81 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 GSTA5Q7RTV2 222 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 SLC7A14Q8TBB6 771 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 GOLGA6BA6NDN3 693 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 APOC4-APOC2K7ER74 178 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 SOAT2O75908 522 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 VNN2O95498 520 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 APOC2P02655 101 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 CSF2RAP15509 400 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 SLC5A3P53794 718 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 PDK2Q15119 407 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 C1orf228Q6PIY5 440 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 VN1R3Q9BXE9 311 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 CRISPLD1Q9H336 500 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 C11orf49Q9H6J7 331 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 LRRC4CQ9HCJ2 640 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 WDR6Q9NNW5 1121 aaKnown RBP19.17■□□□□ 0.66
USP39-201ENST00000323701 AAASQ9NRG9 546 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 FZD10Q9ULW2 581 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 DRG1Q9Y295 367 aaKnown RBP19.17■□□□□ 0.66
USP39-201ENST00000323701 PATJQ8NI35 1801 aa19.17■□□□□ 0.66
USP39-201ENST00000323701 CAPN9O14815 690 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 ADCY8P40145 1251 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 ARPP19P56211 112 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 DEFB103AP81534 67 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 IKBKEQ14164 716 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 BSPRYQ5W0U4 402 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 FAM117BQ6P1L5 589 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 CNKSR3Q6P9H4 555 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 RHBDF2Q6PJF5 856 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 C4orf50Q6ZRC1 276 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 ZNF365Q70YC5 407 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 SCN4BQ8IWT1 228 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 UNC45BQ8IWX7 931 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 GPR152Q8TDT2 470 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 FAF2Q96CS3 445 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 COLEC11Q9BWP8 271 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 ADAM7Q9H2U9 754 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 EPB41L4BQ9H329 900 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 CWH43Q9H720 699 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 ETNK2Q9NVF9 386 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 FEZ2Q9UHY8 353 aaPredicted RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 ATP8A1Q9Y2Q0 1164 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 HOXA2O43364 376 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 DGKIO75912 1065 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 PARNO95453 639 aaKnown RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 ITGAVP06756 1048 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 GOT1P17174 413 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 CHKAP35790 457 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 ITGA8P53708 1063 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 GYS2P54840 703 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 PRSS55Q6UWB4 352 aaPredicted RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 SYDE1Q6ZW31 735 aaPredicted RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 CCDC33Q8N5R6 958 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 OR2W6PQ8NHA6 318 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 SNF8Q96H20 258 aa19.16■□□□□ 0.66
USP39-201ENST00000323701 MAK16Q9BXY0 300 aaKnown RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 PRDM5Q9NQX1 630 aaPredicted RBP19.16■□□□□ 0.66
USP39-201ENST00000323701 COL4A4P53420 1690 aaPredicted RBP19.15■□□□□ 0.66
USP39-201ENST00000323701 PPFIA2O75334 1257 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 RDXP35241 583 aaKnown RBP19.15■□□□□ 0.66
USP39-201ENST00000323701 DEUP1Q05D60 604 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 SLC9A4Q6AI14 798 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 MAP7D3Q8IWC1 876 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 LRRC43Q8N309 656 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 NETO2Q8NC67 525 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 MRPL9Q9BYD2 267 aaKnown RBP19.15■□□□□ 0.66
USP39-201ENST00000323701 WHRNQ9P202 907 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 STAP1Q9ULZ2 295 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 SF3B1O75533 1304 aaKnown RBP eCLIP19.15■□□□□ 0.663e-9■■■■■ 206.8
USP39-201ENST00000323701 FAM72CH0Y354 149 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 SGK1O00141 431 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 POLR3GO15318 223 aaPredicted RBP19.15■□□□□ 0.66
USP39-201ENST00000323701 ADAM12O43184 909 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 TBC1D4O60343 1298 aa19.15■□□□□ 0.66
USP39-201ENST00000323701 IFNB1P01574 187 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms