RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GTF2IRD1Q9UHL9 959 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 GOLGA8RI6L899 631 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 PIRO00625 290 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 PIAS1O75925 651 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 FGFR1P11362 822 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 TPSB2P20231 275 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 PRKCHP24723 683 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 TMEM62Q0P6H9 643 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 TPSAB1Q15661 275 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 CAND1Q86VP6 1230 aaKnown RBP23.2■■□□□ 1.3
PNKP-201ENST00000322344 VPS52Q8N1B4 723 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 C7orf31Q8N865 590 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 TACO1Q9BSH4 297 aaKnown RBP23.2■■□□□ 1.3
PNKP-201ENST00000322344 DPEP3Q9H4B8 488 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 PRDM16Q9HAZ2 1276 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 GDAP2Q9NXN4 497 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 SLC17A7Q9P2U7 560 aa23.2■■□□□ 1.3
PNKP-201ENST00000322344 AVILO75366 819 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 KRT37O76014 449 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 KRT16P08779 473 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 GNL1P36915 607 aaPredicted RBP23.19■■□□□ 1.3
PNKP-201ENST00000322344 SH2D5Q6ZV89 423 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 PLEKHH3Q7Z736 793 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 LRRC6Q86X45 466 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 AGGF1Q8N302 714 aaeCLIP23.19■■□□□ 1.3
PNKP-201ENST00000322344 KIF2BQ8N4N8 673 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 INPP5DQ92835 1189 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 THOC1Q96FV9 657 aaKnown RBP23.19■■□□□ 1.3
PNKP-201ENST00000322344 SERAC1Q96JX3 654 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 KLF6Q99612 283 aaPredicted RBP23.19■■□□□ 1.3
PNKP-201ENST00000322344 OSMRQ99650 979 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 LRMDAQ9H2I8 198 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 SNX25Q9H3E2 840 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 DHX35Q9H5Z1 703 aaKnown RBP23.19■■□□□ 1.3
PNKP-201ENST00000322344 SLC5A4Q9NY91 659 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 AP4E1Q9UPM8 1137 aa23.19■■□□□ 1.3
PNKP-201ENST00000322344 MBLAC1A4D2B0 266 aaPredicted RBP23.18■■□□□ 1.3
PNKP-201ENST00000322344 C1QAP02745 245 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 APRTP07741 180 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 SMIM10L2AP0DMW4 78 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 SMIM10L2BP0DMW5 78 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 PARP6Q2NL67 630 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 GLRA4Q5JXX5 417 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 STRADAQ7RTN6 431 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 CEP57Q86XR8 500 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 KBTBD7Q8WVZ9 684 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 QKIQ96PU8 341 aaKnown RBP eCLIP23.18■■□□□ 1.3
PNKP-201ENST00000322344 NXF3Q9H4D5 531 aaKnown RBP23.18■■□□□ 1.3
PNKP-201ENST00000322344 HES2Q9Y543 173 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 KPNA7A9QM74 516 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 HGSO14964 777 aaPredicted RBP23.18■■□□□ 1.3
PNKP-201ENST00000322344 F2P00734 622 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 SNRPAP09012 282 aaKnown RBP23.18■■□□□ 1.3
PNKP-201ENST00000322344 CYP2C9P11712 490 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 ADORA2BP29275 332 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 ETV4P43268 484 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 CCDC110Q8TBZ0 833 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 BRI3BPQ8WY22 251 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 CDHR5Q9HBB8 845 aa23.18■■□□□ 1.3
PNKP-201ENST00000322344 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.18■■□□□ 1.3
PNKP-201ENST00000322344 SCN1AP35498 2009 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 IL1BP01584 269 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 CCDC130P13994 396 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 KCNE1P15382 129 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 MAGEA3P43357 314 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 RASSF2P50749 326 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 EFHC1Q5JVL4 640 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 SYCP2LQ5T4T6 812 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 FAXCQ5TGI0 409 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 NLRP9Q7RTR0 991 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 TMEM237Q96Q45 408 aa23.17■■□□□ 1.3
PNKP-201ENST00000322344 XAB2Q9HCS7 855 aaKnown RBP23.17■■□□□ 1.3
PNKP-201ENST00000322344 RCOR3Q9P2K3 495 aaPredicted RBP23.17■■□□□ 1.3
PNKP-201ENST00000322344 WDR91A4D1P6 747 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 HACD1B0YJ81 288 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 APOEP02649 317 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 PYGBP11216 843 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 LCP1P13796 627 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 IRF5Q13568 498 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 XKR4Q5GH76 650 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 BZW1Q7L1Q6 419 aaKnown RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 LIMS2Q7Z4I7 341 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 PRPF39Q86UA1 669 aaKnown RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 CTAGE3PQ8IX95 158 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 PPM1NQ8N819 430 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 CLEC4CQ8WTT0 213 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 TRIM55Q9BYV6 548 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 NPHS2Q9NP85 383 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 SMIM28A0A1B0GU29 152 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 SLC15A5A6NIM6 579 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 HNRNPCL1O60812 293 aaKnown RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 TGDSO95455 350 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 TFE3P19532 575 aaPredicted RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 TAF6P49848 677 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 GBE1Q04446 702 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 SV2CQ496J9 727 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 PSTKQ8IV42 348 aaKnown RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 APPL2Q8NEU8 664 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 MTBPQ96DY7 904 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms