RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SPTBN2O15020 2390 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 DOCK3Q8IZD9 2030 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 E5RI56 91 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 RPS8P62241 208 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TSC22D1Q15714 1073 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SLC15A2Q16348 729 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ZFP69Q49AA0 526 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 KLHDC10Q6PID8 442 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 LINC00523Q86TU6 105 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 DHFR2Q86XF0 187 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 P3H2Q8IVL5 708 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 PROX1Q92786 737 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ZNF570Q96NI8 536 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 GINS4Q9BRT9 223 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 OSBPL7Q9BZF2 842 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ENTPD7Q9NQZ7 604 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 UBA2Q9UBT2 640 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 NXF1Q9UBU9 619 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 DNAJB4Q9UDY4 337 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ENOPH1Q9UHY7 261 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 DSEQ9UL01 958 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 WBP11Q9Y2W2 641 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 COQ6Q9Y2Z9 468 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ATRNO75882 1429 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 USP31Q70CQ4 1352 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 KMT2EQ8IZD2 1858 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SPDYE5A6NIY4 337 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ASLP04424 464 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 IL6P05231 212 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 FDFT1P37268 417 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SMTNL2Q2TAL5 461 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 EID3Q8N140 333 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SNX31Q8N9S9 440 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 OSCP1Q8WVF1 389 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 COMMD8Q9NX08 183 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 A0A0U1RQJ8 604 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 GSC2O15499 205 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 FAM98BQ52LJ0 330 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ACAD10Q6JQN1 1059 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ADGRF4Q8IZF3 695 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TAGAPQ8N103 731 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 KIAA0895Q8NCT3 520 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 RHOBTB2Q9BYZ6 727 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 RPRD1BQ9NQG5 326 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 PLK2Q9NYY3 685 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TPRKBQ9Y3C4 175 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 RREB1Q92766 1687 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ERVV-1B6SEH8 477 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 BAIAP3O94812 1187 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 GTF2H1P32780 548 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 NSUN2Q08J23 767 aaKnown RBP eCLIP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 EIF2B5Q13144 721 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TBC1D10BQ4KMP7 808 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 CCNJLQ8IV13 435 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ATG4AQ8WYN0 398 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 COPS7BQ9H9Q2 264 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 OSGEPQ9NPF4 335 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 OLA1Q9NTK5 396 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ARID2Q68CP9 1835 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SDR42E2A6NKP2 422 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 CENPXA8MT69 81 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 KIAA0391O15091 583 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 NDUFB5O43674 189 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ALOX12P18054 663 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SLC9A1P19634 815 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 STIP1P31948 543 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 FITM2Q8N6M3 262 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ART4Q93070 314 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 GPBP1L1Q9HC44 474 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 SPAG4Q9NPE6 437 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 DNAJC16Q9Y2G8 782 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 FAM32AQ9Y421 112 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 H7C1W4 665 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 AGPSO00116 658 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 CLOCKO15516 846 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 CYP11B1P15538 503 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TGM2P21980 687 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TIMM50Q3ZCQ8 353 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ZNF667Q5HYK9 610 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ATG9AQ7Z3C6 839 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 TFB1MQ8WVM0 346 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 MMTAG2Q9BU76 263 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 AP4B1Q9Y6B7 739 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 ADAMTS2O95450 1211 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 S100A9P06702 114 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 HSMCR30P0CW71 290 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TKTP29401 623 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TALDO1P37837 337 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 ERI1Q8IV48 349 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SMYD1Q8NB12 490 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SEMA6BQ9H3T3 888 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 NCKIPSDQ9NZQ3 722 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TM7SF2O76062 418 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 SEC24AO95486 1093 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 TFE3P19532 575 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 HOXA13P31271 388 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 RAP1GAPP47736 663 aa7.25□□□□□ -1.25
SMC1A-201ENST00000322213 PURAQ00577 322 aaKnown RBP7.25□□□□□ -1.25
SMC1A-201ENST00000322213 NCOA4Q13772 614 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms