RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 WDR49Q8IV35 697 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 ABI1Q8IZP0 508 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 IPMKQ8NFU5 416 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 RFWD2Q8NHY2 731 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 PCYOX1Q9UHG3 505 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 NOCTQ9UK39 431 aaKnown RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 FAM155BO75949 473 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 F7P08709 466 aaPredicted RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 SNRPAP09012 282 aaKnown RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 TMED10P49755 219 aaKnown RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 OCRLQ01968 901 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 SLC1A5Q15758 541 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 ERLEC1Q96DZ1 483 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 MECRQ9BV79 373 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 WDR35Q9P2L0 1181 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 PABPN1LA6NDY0 278 aaKnown RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 C16orf72Q14CZ0 275 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 PTPN20Q4JDL3 420 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 POLNQ7Z5Q5 900 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 ALYREFQ86V81 257 aaKnown RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 CDKL3Q8IVW4 592 aaPredicted RBP15.76■□□□□ 0.11
VARS2-201ENST00000321897 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 DEFB107AQ8IZN7 70 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 GDPD5Q8WTR4 605 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 INPP5DQ92835 1189 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 CDCA5Q96FF9 252 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 LPIN3Q9BQK8 851 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 GOLGA2P5Q9HBQ8 144 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 CPA4Q9UI42 421 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 SLC39A10Q9ULF5 831 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 ASB14A6NK59 587 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 GMNNO75496 209 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 RPL22P35268 128 aaKnown RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 NUDT2P50583 147 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 COPAP53621 1224 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 NCKAP1LP55160 1127 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 SH3PXD2AQ5TCZ1 1133 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 XRRA1Q6P2D8 792 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 RASGEF1CQ8N431 466 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 TFAP2BQ92481 460 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 OXNAD1Q96HP4 312 aaPredicted RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 SLITRK1Q96PX8 696 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 PRG3Q9Y2Y8 225 aaPredicted RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 AKAP11Q9UKA4 1901 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 LRP6O75581 1613 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 CCDC189A1A4V9 331 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 E9PBE3 544 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 DHX15O43143 795 aaKnown RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 TSPAN3O60637 253 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 KLHL41O60662 606 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 PAEPP09466 180 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 MSX2P35548 267 aaPredicted RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 SNRPFP62306 86 aaKnown RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 SP2Q02086 613 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 ARL13BQ3SXY8 428 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 UTS2BQ765I0 119 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 DNAJB3Q8WWF6 145 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 CPXM1Q96SM3 734 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 MRIQ9BWK5 157 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 CCDC68Q9H2F9 335 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 GRHL1Q9NZI5 618 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 FAM8A1Q9UBU6 413 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 SPTLC1O15269 473 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 ZC3H11AO75152 810 aaKnown RBP eCLIP15.75■□□□□ 0.117e-22■■■■■ 33.3
VARS2-201ENST00000321897 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 LPCAT4Q643R3 524 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 RIPOR1Q6ZS17 1223 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 REPS2Q8NFH8 660 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 USP13Q92995 863 aaPredicted RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 PPP2R3CQ969Q6 453 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 ARHGEF3Q9NR81 526 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 C20orf96Q9NUD7 363 aaPredicted RBP15.75■□□□□ 0.11
VARS2-201ENST00000321897 PAK5Q9P286 719 aa15.75■□□□□ 0.11
VARS2-201ENST00000321897 TTLL13PA6NNM8 815 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 B3GAT3O94766 335 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 LINGO3P0C6S8 592 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 SERPINB5P36952 375 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 MLH1P40692 756 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 RAB27AP51159 221 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 GALK1P51570 392 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 MAP3K7CLP57077 242 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 GAD2Q05329 585 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 TRIM67Q6ZTA4 783 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 TTC7BQ86TV6 843 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 METTL23Q86XA0 190 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 EPAS1Q99814 870 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 CDT1Q9H211 546 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 AK5Q9Y6K8 562 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 FSCN2O14926 492 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 LIASO43766 372 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 TMCC1O94876 653 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 PROCP04070 461 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 KCNA2P16389 499 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 ETFBP38117 255 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 ADARP55265 1226 aaKnown RBP15.74■□□□□ 0.11
VARS2-201ENST00000321897 EFHC1Q5JVL4 640 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 ZDHHC24Q6UX98 284 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 CATSPERGQ6ZRH7 1159 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms