RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MMRN1Q13201 1228 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 CA9Q16790 459 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 VARS2Q5ST30 1063 aaKnown RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 RELL1Q8IUW5 271 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 LRRC43Q8N309 656 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 PLD5Q8N7P1 536 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 PCDH19Q8TAB3 1148 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 C8orf48Q96LL4 319 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 FAM118BQ9BPY3 351 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 PABPC3Q9H361 631 aaKnown RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 MARCH5Q9NX47 278 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 ANAPC5Q9UJX4 755 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 NFS1Q9Y697 457 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 M0QYT0 321 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 SMAPO00193 183 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 DNALI1O14645 258 aaPredicted RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 TNFRSF10BO14763 440 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 GALTP07902 379 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 NR2C2P49116 596 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 SLC11A1P49279 550 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 ITGA8P53708 1063 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 EIF3EP60228 445 aaKnown RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 DEUP1Q05D60 604 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 IKBKEQ14164 716 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 SYPL2Q5VXT5 272 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 ZNF280DQ6N043 979 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 HIBCHQ6NVY1 386 aaPredicted RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 HFE2Q6ZVN8 426 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 PCGF5Q86SE9 256 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 CALCOCO1Q9P1Z2 691 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 NAALADL1Q9UQQ1 740 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 CFAP69A5D8W1 941 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 NUDT17P0C025 328 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 CYP2C18P33260 490 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 BCAR1P56945 870 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 GABPB1Q06547 395 aaPredicted RBP18.55■□□□□ 0.56
RAB39A-201ENST00000320578 XRCC4Q13426 336 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 TRMT10CQ7L0Y3 403 aaKnown RBP18.55■□□□□ 0.56
RAB39A-201ENST00000320578 CCDC185Q8N715 623 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 HAUS1Q96CS2 278 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 KCTD15Q96SI1 283 aaPredicted RBP18.55■□□□□ 0.56
RAB39A-201ENST00000320578 RHOBTB2Q9BYZ6 727 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 DHX35Q9H5Z1 703 aaKnown RBP18.55■□□□□ 0.56
RAB39A-201ENST00000320578 GPATCH2LQ9NWQ4 482 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 PLAAQ9Y263 795 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 ATP8A1Q9Y2Q0 1164 aa18.55■□□□□ 0.56
RAB39A-201ENST00000320578 TBKBP1A7MCY6 615 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 H7C4K7 107 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 TRIM66O15016 1216 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 TBC1D4O60343 1298 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 RBP3P10745 1247 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 PECAM1P16284 738 aaPredicted RBP18.54■□□□□ 0.56
RAB39A-201ENST00000320578 CYP2F1P24903 491 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 ATXN1P54253 815 aaKnown RBP18.54■□□□□ 0.56
RAB39A-201ENST00000320578 MORF4L2Q15014 288 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 SLC39A12Q504Y0 691 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 FAM171A1Q5VUB5 890 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 IZUMO3Q5VZ72 239 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 FUT10Q6P4F1 479 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 RSAD2Q8WXG1 361 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 RTP4Q96DX8 246 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 TMEM121Q9BTD3 319 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 PPP1R12CQ9BZL4 782 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 TPX2Q9ULW0 747 aaKnown RBP18.54■□□□□ 0.56
RAB39A-201ENST00000320578 PCDHB5Q9Y5E4 795 aa18.54■□□□□ 0.56
RAB39A-201ENST00000320578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 BCLAF3A2AJT9 711 aaKnown RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 SGK1O00141 431 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 RNF40O75150 1001 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 CLTBP09497 229 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 NCAM1P13591 858 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ARL4AP40617 200 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 TRIP13Q15645 432 aaPredicted RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 CTXN3Q4LDR2 81 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 BSPRYQ5W0U4 402 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 BZW1Q7L1Q6 419 aaKnown RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 CROCCP2Q86T23 111 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 FAM131BQ86XD5 332 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 UBLCP1Q8WVY7 318 aaPredicted RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 CSPG4P5Q96PW8 444 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 GPR62Q9BZJ7 368 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 PHACTR1Q9C0D0 580 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ADAM7Q9H2U9 754 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 WDR6Q9NNW5 1121 aaKnown RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 TMEM39AQ9NV64 488 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 SAE1Q9UBE0 346 aaPredicted RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 FBXW11Q9UKB1 542 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 CARNS1A5YM72 827 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 H3BRJ5 948 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ZNF189O75820 626 aaPredicted RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 EFEMP2O95967 443 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 PTPRDP23468 1912 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ADRA1BP35368 520 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 GRIK1P39086 918 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 HCAR3P49019 387 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 GATMP50440 423 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ROR1Q01973 937 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 P3H1Q32P28 736 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 PPP6R3Q5H9R7 873 aaPredicted RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 EFHC2Q5JST6 749 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms