RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 URGCPQ8TCY9 931 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 MARK4Q96L34 752 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 MRPL1Q9BYD6 325 aaKnown RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CASS4Q9NQ75 786 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 DDX3YO15523 660 aaKnown RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 TSPAN8P19075 237 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 DRD4P21917 467 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 RECQLP46063 649 aaPredicted RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 TAF5Q15542 800 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 PTPN20Q4JDL3 420 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 DACT3Q96B18 629 aaPredicted RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CNBD2Q96M20 576 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 APBA2Q99767 749 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 FICDQ9BVA6 458 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 ZNF518BQ9C0D4 1074 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 KDM4CQ9H3R0 1056 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 A0A0B4J269 797 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 LIASO43766 372 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 SPAG6O75602 509 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 LSM8O95777 96 aaKnown RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CFHP08603 1231 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CPA3P15088 417 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 ACADSBP45954 432 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 PTK6Q13882 451 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 ZRANB3Q5FWF4 1079 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 HYIQ5T013 277 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CAAP1Q9H8G2 361 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 AVENQ9NQS1 362 aaPredicted RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 RBM22Q9NW64 420 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 SMPD4Q9NXE4 827 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 FAM53CQ9NYF3 392 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 FAM83EQ2M2I3 478 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 DNAL1Q4LDG9 190 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 INPP5DQ92835 1189 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CMTM5Q96DZ9 223 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CPXM1Q96SM3 734 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 ILKAPQ9H0C8 392 aaPredicted RBP16.99■□□□□ 0.31
CLIP4-201ENST00000320081 ADNPQ9H2P0 1102 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 LGALS2P05162 132 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 CYP1A2P05177 515 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 MCF2P10911 925 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 DDX39BQ13838 428 aaKnown RBP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 THEMIS2Q5TEJ8 643 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 CATSPER2Q96P56 530 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 PCYOX1Q9UHG3 505 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 PNMA8BQ9ULN7 279 aaPredicted RBP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 BDNFP23560 247 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 EPHX2P34913 555 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 SCUBE1Q8IWY4 988 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 HELQQ8TDG4 1101 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 CYGBQ8WWM9 190 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 SNX19Q92543 992 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 SLC17A7Q9P2U7 560 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 M0R2N6 131 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 SMNDC1O75940 238 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 ELF3P78545 371 aaPredicted RBP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 NAPEPLDQ6IQ20 393 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 IZUMO2Q6UXV1 221 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 FAM183BPQ6ZVS7 135 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 HTR3CQ8WXA8 447 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 LENG9Q96B70 501 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 TUBGCP3Q96CW5 907 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 ZBTB18Q99592 522 aa16.98■□□□□ 0.31
CLIP4-201ENST00000320081 SNRNP25Q9BV90 132 aaKnown RBP16.98■□□□□ 0.31
CLIP4-201ENST00000320081 EEF1DP29692 281 aaKnown RBP16.97■□□□□ 0.31
CLIP4-201ENST00000320081 ADSSP30520 456 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 BMT2Q1RMZ1 405 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 ZCCHC9Q8N567 271 aaKnown RBP16.97■□□□□ 0.31
CLIP4-201ENST00000320081 DNERQ8NFT8 737 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 RAET1EQ8TD07 263 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 NAF1Q96HR8 494 aaKnown RBP16.97■□□□□ 0.31
CLIP4-201ENST00000320081 ULBP1Q9BZM6 244 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 VANGL2Q9ULK5 521 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 ORC6Q9Y5N6 252 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 A8MX80 341 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 THP07101 528 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 PIRTP0C851 137 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CETPP11597 493 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 ITGB6P18564 788 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CLK2P49760 499 aaKnown RBP16.97■□□□□ 0.31
CLIP4-201ENST00000320081 KPNB1Q14974 876 aaKnown RBP16.97■□□□□ 0.31
CLIP4-201ENST00000320081 SDHAF4Q5VUM1 108 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 KATNAL2Q8IYT4 538 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 MIER2Q8N344 545 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 OR52K1Q8NGK4 314 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 LPPQ93052 612 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 RNPEPQ9H4A4 650 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms