RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 TMC3Q7Z5M5 1100 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 MDM1Q8TC05 714 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 FNIP1Q8TF40 1166 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 STK32AQ8WU08 396 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 AZIN2Q96A70 460 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SLITRK1Q96PX8 696 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 ERP44Q9BS26 406 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 CCDC28BQ9BUN5 200 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 ADAM7Q9H2U9 754 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 VCX3BQ9H321 246 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 VCX3AQ9NNX9 186 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 G3BP2Q9UN86 482 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 ZNF510Q9Y2H8 683 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 ARL5CA6NH57 179 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 C3orf70A6NLC5 250 aaPredicted RBP13.59□□□□□ -0.23
CPNE1-201ENST00000317677 GPR182O15218 404 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 SUN1O94901 812 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 NUDT17P0C025 328 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
CPNE1-201ENST00000317677 PNPLA4P41247 253 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 SCNN1GP51170 649 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 STILQ15468 1287 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 TAF5Q15542 800 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 SH3PXD2AQ5TCZ1 1133 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 TRIM68Q6AZZ1 485 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 RNF180Q86T96 592 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 FAM118BQ9BPY3 351 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 TXLNGYQ9BZA5 131 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 DCLK3Q9C098 648 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 TRPV6Q9H1D0 765 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 SYNCQ9H7C4 482 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 ZDHHC18Q9NUE0 388 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 GRHL1Q9NZI5 618 aa13.59□□□□□ -0.23
CPNE1-201ENST00000317677 ATP5HO75947 161 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 KRT1P04264 644 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TPBGLP0DKB5 382 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 KRT10P13645 584 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 GNL1P36915 607 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 POLE2P56282 527 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 CCDC15Q0P6D6 951 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 FAM102AQ5T9C2 384 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TRIM42Q8IWZ5 723 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 ADGRF2Q8IZF7 708 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 APPL2Q8NEU8 664 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 UBLCP1Q8WVY7 318 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 DPF3Q92784 378 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 PTPRN2Q92932 1015 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 PPP1R14BQ96C90 147 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 NDNQ99608 321 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 CIDEBQ9UHD4 219 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 SCOCQ9UIL1 159 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 MTUS1Q9ULD2 1270 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 C2CD4BA6NLJ0 364 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 A8MUI8 341 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 PAPSS1O43252 624 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 ZNF623O75123 536 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 ADORA2BP29275 332 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 RPL21P46778 160 aaKnown RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 CLCNKBP51801 687 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 WSCD1Q658N2 575 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 OR6B2Q6IFH4 312 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TMEM110Q86TL2 294 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TOP6BLQ8N6T0 577 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TMEM237Q96Q45 408 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 PEBP4Q96S96 227 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 TRAIPQ9BWF2 469 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 PLVAPQ9BX97 442 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 IQCGQ9H095 443 aaKnown RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 GIT1Q9Y2X7 761 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 SNX24Q9Y343 169 aa13.58□□□□□ -0.24
CPNE1-201ENST00000317677 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
CPNE1-201ENST00000317677 CYB561D2O14569 222 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 TP73O15350 636 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 GRAP2O75791 330 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 CABYRO75952 493 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 UPP2O95045 317 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 ECEL1O95672 775 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 RPLP2P05387 115 aaKnown RBP13.57□□□□□ -0.24
CPNE1-201ENST00000317677 ACAT1P24752 427 aaKnown RBP13.57□□□□□ -0.24
CPNE1-201ENST00000317677 SMTNL2Q2TAL5 461 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 RNF220Q5VTB9 566 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 CD300LGQ6UXG3 332 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms