RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 C12orf40Q86WS4 652 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 TTC30AQ86WT1 665 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 TMEM25Q86YD3 366 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 SFTPA1Q8IWL2 248 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 BBS7Q8IWZ6 715 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 NAT16Q8N8M0 369 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 CCDC150Q8NCX0 1101 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 MDGA1Q8NFP4 955 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 NT5C1AQ9BXI3 368 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 KLF16Q9BXK1 252 aaPredicted RBP8.6□□□□□ -1.03
TPM3-203ENST00000312970 TMEM121BQ9BXQ6 578 aaPredicted RBP8.6□□□□□ -1.03
TPM3-203ENST00000312970 SCAND2PQ9GZW5 306 aaPredicted RBP8.6□□□□□ -1.03
TPM3-203ENST00000312970 CYP3A43Q9HB55 503 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 SPHK2Q9NRA0 654 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 FAM49BQ9NUQ9 324 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 DEC1Q9P2X7 70 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 HMGXB4Q9UGU5 601 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 MAPK8IP1Q9UQF2 711 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 SCML2Q9UQR0 700 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 ZDHHC9Q9Y397 364 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 ATP6V1DQ9Y5K8 247 aa8.6□□□□□ -1.03
TPM3-203ENST00000312970 IGSF10Q6WRI0 2623 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 A0A1W2PQ27 194 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 A0A1W2PQ64 194 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 A0A1W2PQD8 194 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 KHNYNO15037 678 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 HOXC11O43248 304 aaPredicted RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 TULP3O75386 442 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 GABBR2O75899 941 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 ZNF202O95125 648 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 TBX18O95935 607 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 IRF1P10914 325 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 HNRNPLP14866 589 aaKnown RBP eCLIP8.59□□□□□ -1.03
TPM3-203ENST00000312970 ACO1P21399 889 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 PLA2G4AP47712 749 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 GCLMP48507 274 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 PGFP49763 221 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 CLCN6P51797 869 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 MCCD1P59942 119 aaPredicted RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 SHC2P98077 582 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 KDSRQ06136 332 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 PPP3CAQ08209 521 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 GOLGA8FQ08AF8 430 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 GOLGA8DPQ0D2H9 430 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 INCA1Q0VD86 236 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 DPYDQ12882 1025 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 KRBA2Q6ZNG9 492 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 CLEC20AQ6ZU45 233 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 TRMT11Q7Z4G4 463 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 ETFBKMTQ8IXQ9 262 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 FAM186BQ8IYM0 893 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 GUF1Q8N442 669 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 OLIG1Q8TAK6 271 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 WHAMMQ8TF30 809 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 UBXN4Q92575 508 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 WBP2Q969T9 261 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 FAXDC2Q96IV6 333 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 XPO6Q96QU8 1125 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 LSM14BQ9BX40 385 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 APOBEC3GQ9HC16 384 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 PNPLA8Q9NP80 782 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 CYLDQ9NQC7 956 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.038e-7■■■■■ 194.6
TPM3-203ENST00000312970 BCCIPQ9P287 314 aaKnown RBP eCLIP8.59□□□□□ -1.03
TPM3-203ENST00000312970 WDR35Q9P2L0 1181 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 LSM7Q9UK45 103 aaKnown RBP8.59□□□□□ -1.03
TPM3-203ENST00000312970 PCDHA5Q9Y5H7 936 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 NUP205Q92621 2012 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 MYH10P35580 1976 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 ABCA7Q8IZY2 2146 aa8.59□□□□□ -1.03
TPM3-203ENST00000312970 HELZ2Q9BYK8 2649 aaKnown RBP8.58□□□□□ -1.04
TPM3-203ENST00000312970 HHLA1C9JL84 531 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 ATP9BO43861 1147 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 ADAM23O75077 832 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 CILPO75339 1184 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 PROS1P07225 676 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 TRIM49P0CI25 452 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 TRIM49CP0CI26 452 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 RARGP13631 454 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
TPM3-203ENST00000312970 CD58P19256 250 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 BCKDHBP21953 392 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 GTF2H1P32780 548 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 P2RY2P41231 377 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 DHPSP49366 369 aaPredicted RBP8.58□□□□□ -1.04
TPM3-203ENST00000312970 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
TPM3-203ENST00000312970 SPDYCQ5MJ68 293 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 DAB2IPQ5VWQ8 1189 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 KRT39Q6A163 491 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 TCEAL6Q6IPX3 200 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 SDE2Q6IQ49 451 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 KLHDC10Q6PID8 442 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 LPCAT2Q7L5N7 544 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 GPRIN1Q7Z2K8 1008 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 CYP2U1Q7Z449 544 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 TADA2BQ86TJ2 420 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 PGBD3Q8N328 593 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 ZNF276Q8N554 614 aa8.58□□□□□ -1.04
TPM3-203ENST00000312970 TTC39CQ8N584 583 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms