RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FAM131BQ86XD5 332 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 LRRC43Q8N309 656 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 CCDC185Q8N715 623 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 PGAP3Q96FM1 320 aaPredicted RBP17.41■□□□□ 0.38
CLCF1-201ENST00000312438 ANAPC5Q9UJX4 755 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 ATP8A1Q9Y2Q0 1164 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 SGK1O00141 431 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 APOL1O14791 398 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 MCF2LO15068 1137 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 TP73O15350 636 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 F9P00740 461 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 ZFXP17010 805 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 TGM2P21980 687 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 STIP1P31948 543 aaKnown RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 ITGA8P53708 1063 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 AIF1P55008 147 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 BCAR1P56945 870 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 EIF3EP60228 445 aaKnown RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 OTUD1Q5VV17 481 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 ZNF280DQ6N043 979 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 FUT10Q6P4F1 479 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 VSTM1Q6UX27 236 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 BEND5Q7L4P6 421 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PQLC3Q8N755 202 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PLD5Q8N7P1 536 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PCDH19Q8TAB3 1148 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 SLC7A14Q8TBB6 771 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 ZBTB9Q96C00 473 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 MTMR10Q9NXD2 777 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PECAM1P16284 738 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 VPS41P49754 854 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 NME3Q13232 169 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 NOMO1Q15155 1222 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 BSPRYQ5W0U4 402 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 RHBDF2Q6PJF5 856 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 LRIG3Q6UXM1 1119 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 DNAJC5GQ8N7S2 189 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 UBLCP1Q8WVY7 318 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 RSAD2Q8WXG1 361 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 OXCT2Q9BYC2 517 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PRDM16Q9HAZ2 1276 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 ABI2Q9NYB9 513 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 RCOR3Q9P2K3 495 aaPredicted RBP17.4■□□□□ 0.38
CLCF1-201ENST00000312438 PCDHB5Q9Y5E4 795 aa17.4■□□□□ 0.38
CLCF1-201ENST00000312438 TNFRSF10BO14763 440 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 NDC80O14777 642 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 RBP3P10745 1247 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 RARGP13631 454 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 SLC5A3P53794 718 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 PMS2P54278 862 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 UAP1Q16222 522 aaPredicted RBP17.39■□□□□ 0.37
CLCF1-201ENST00000312438 PAWRQ96IZ0 340 aaKnown RBP17.39■□□□□ 0.37
CLCF1-201ENST00000312438 C8orf48Q96LL4 319 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 KCTD15Q96SI1 283 aaPredicted RBP17.39■□□□□ 0.37
CLCF1-201ENST00000312438 SH3GL2Q99962 352 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 PCDH9Q9HC56 1237 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 PIGVQ9NUD9 493 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 PLAAQ9Y263 795 aa17.39■□□□□ 0.37
CLCF1-201ENST00000312438 SYNJ2BP-COX16A0A087WUM0 186 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 NT5C1B-RDH14C9J2C7 533 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 H7C4K7 107 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 TRIM66O15016 1216 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 DGKIO75912 1065 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 UPP2O95045 317 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 IFNB1P01574 187 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 ZSCAN5DPP0CG00 497 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 ARL4AP40617 200 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 ALDH7A1P49419 539 aaKnown RBP17.38■□□□□ 0.37
CLCF1-201ENST00000312438 SMARCB1Q12824 385 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 P3H1Q32P28 736 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 IZUMO3Q5VZ72 239 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 C1orf228Q6PIY5 440 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 PRUNE1Q86TP1 453 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 SCN4BQ8IWT1 228 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 GLIS1Q8NBF1 620 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 SCAMP5Q8TAC9 235 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 RIN2Q8WYP3 895 aaPredicted RBP17.38■□□□□ 0.37
CLCF1-201ENST00000312438 NTAN1Q96AB6 310 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 CSPG4P5Q96PW8 444 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 PABPC3Q9H361 631 aaKnown RBP17.38■□□□□ 0.37
CLCF1-201ENST00000312438 CWC15Q9P013 229 aaKnown RBP17.38■□□□□ 0.37
CLCF1-201ENST00000312438 COX16Q9P0S2 106 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 HCSTQ9UBK5 93 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 BRCA2P51587 3418 aa17.38■□□□□ 0.37
CLCF1-201ENST00000312438 ABHD14A-ACY1A0A1B0GW23 586 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 DNALI1O14645 258 aaPredicted RBP17.37■□□□□ 0.37
CLCF1-201ENST00000312438 POLR3GO15318 223 aaPredicted RBP17.37■□□□□ 0.37
CLCF1-201ENST00000312438 ETS1P14921 441 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 ADRA1BP35368 520 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 MAGEA11P43364 429 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 NR2C2P49116 596 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 GPS1Q13098 491 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 ARL13BQ3SXY8 428 aa17.37■□□□□ 0.37
CLCF1-201ENST00000312438 HIBCHQ6NVY1 386 aaPredicted RBP17.37■□□□□ 0.37
CLCF1-201ENST00000312438 DARS2Q6PI48 645 aaKnown RBP17.37■□□□□ 0.37
CLCF1-201ENST00000312438 NPNTQ6UXI9 565 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms