RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SLC4A5Q9BY07 1137 aa20.74■□□□□ 0.91
VEGFB-201ENST00000309422 HPS4Q9NQG7 708 aa20.74■□□□□ 0.91
VEGFB-201ENST00000309422 GREB1Q4ZG55 1949 aa20.74■□□□□ 0.91
VEGFB-201ENST00000309422 HMBSP08397 361 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 FERP16591 822 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 CD72P21854 359 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 SOX9P48436 509 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 VCPP55072 806 aaKnown RBP20.73■□□□□ 0.91
VEGFB-201ENST00000309422 JAM2P57087 298 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 ARID5AQ03989 594 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 PPP2R5DQ14738 602 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 EFHC1Q5JVL4 640 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 ZNF397Q8NF99 534 aaPredicted RBP20.73■□□□□ 0.91
VEGFB-201ENST00000309422 SERPINB11Q96P15 392 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 IER2Q9BTL4 223 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 KLF16Q9BXK1 252 aaPredicted RBP20.73■□□□□ 0.91
VEGFB-201ENST00000309422 IRF2BPLQ9H1B7 796 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 MYO6Q9UM54 1294 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 HBS1LQ9Y450 684 aaKnown RBP20.73■□□□□ 0.91
VEGFB-201ENST00000309422 MYO10Q9HD67 2058 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 TECTAO75443 2155 aa20.73■□□□□ 0.91
VEGFB-201ENST00000309422 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 SCAMP3O14828 347 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 TARSP26639 723 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 PGFP49763 221 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 CDR2Q01850 454 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 DGKKQ5KSL6 1271 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 OR6B2Q6IFH4 312 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 DPY19L2P1Q6NXN4 242 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 NUDT18Q6ZVK8 323 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 TMEM110Q86TL2 294 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 ERICH1Q86X53 443 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 SCUBE3Q8IX30 993 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 RIN3Q8TB24 985 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 ZFRQ96KR1 1074 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 POPDC2Q9HBU9 364 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 EPHB6O15197 1021 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 TEX33O43247 280 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 HSF2BPO75031 334 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 CYBBP04839 570 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 DCNP07585 359 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 GLI1P08151 1106 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 ADH5P11766 374 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 GJA4P35212 333 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 CHKAP35790 457 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 RPL34P49207 117 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 GAD2Q05329 585 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 ANO4Q32M45 955 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 HTR3DQ70Z44 454 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 NOP9Q86U38 636 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 BBS7Q8IWZ6 715 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 CCDC105Q8IYK2 499 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 TMEM105Q8N8V8 129 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 NDRG1Q92597 394 aaKnown RBP20.72■□□□□ 0.91
VEGFB-201ENST00000309422 CD101Q93033 1021 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 P2RY13Q9BPV8 354 aa20.72■□□□□ 0.91
VEGFB-201ENST00000309422 TPM1P09493 284 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 COL9A1P20849 921 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 DRD1P21728 446 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 CORO1AP31146 461 aaKnown RBP20.71■□□□□ 0.91
VEGFB-201ENST00000309422 NSFP46459 744 aaKnown RBP20.71■□□□□ 0.91
VEGFB-201ENST00000309422 ZNF445P59923 1031 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 YWHAZP63104 245 aaKnown RBP20.71■□□□□ 0.91
VEGFB-201ENST00000309422 ZXDBP98169 803 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 PON2Q15165 354 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 DHCR24Q15392 516 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 ASIC2Q16515 512 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 IER5LQ5T953 404 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 NUGGCQ68CJ6 796 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 PPP1R2P3Q6NXS1 205 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 UNC45BQ8IWX7 931 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 RNF214Q8ND24 703 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 CLEC4CQ8WTT0 213 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 XPO6Q96QU8 1125 aaKnown RBP20.71■□□□□ 0.91
VEGFB-201ENST00000309422 CPXM1Q96SM3 734 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 NUCKS1Q9H1E3 243 aaKnown RBP20.71■□□□□ 0.91
VEGFB-201ENST00000309422 FAM204AQ9H8W3 233 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 ASNSD1Q9NWL6 643 aa20.71■□□□□ 0.91
VEGFB-201ENST00000309422 DENND4CQ5VZ89 1909 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 TYW5A2RUC4 315 aaKnown RBP20.7■□□□□ 0.9
VEGFB-201ENST00000309422 PAPSS1O43252 624 aaPredicted RBP20.7■□□□□ 0.9
VEGFB-201ENST00000309422 STC2O76061 302 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 APOEP02649 317 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 CYP17A1P05093 508 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 MMEP08473 750 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 GBP1P32455 592 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 RPS9P46781 194 aaKnown RBP20.7■□□□□ 0.9
VEGFB-201ENST00000309422 NAA35Q5VZE5 725 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 MSANTD2Q6P1R3 559 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 SYNPOQ8N3V7 929 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 DTWD2Q8NBA8 298 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 C18orf8Q96DM3 657 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 DDX50Q9BQ39 737 aaKnown RBP20.7■□□□□ 0.9
VEGFB-201ENST00000309422 LINC00597Q9H2U6 94 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 SPATA6Q9NWH7 488 aaPredicted RBP20.7■□□□□ 0.9
VEGFB-201ENST00000309422 IFNKQ9P0W0 207 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 WDR35Q9P2L0 1181 aa20.7■□□□□ 0.9
VEGFB-201ENST00000309422 ZNF638Q14966 1978 aaKnown RBP20.69■□□□□ 0.9
VEGFB-201ENST00000309422 CDH5P33151 784 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms