RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SHCBP1Q8NEM2 672 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 PPWD1Q96BP3 646 aaKnown RBP15.12■□□□□ 0.01
PTPN9-201ENST00000306726 PTPRHQ9HD43 1115 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 RABGEF1Q9UJ41 708 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 NENFQ9UMX5 172 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 A0A0G2JMZ2 1700 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 HMGCRP04035 888 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 CCND2P30279 289 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 GSTT1P30711 240 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 MLH1P40692 756 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 PRAMEP78395 509 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 GHRHRQ02643 423 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 NOGQ13253 232 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 LAMB3Q13751 1172 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 CYP1B1Q16678 543 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 MON1BQ7L1V2 547 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 B3GNT5Q9BYG0 378 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 hCG_1818297A0A087WSY0 165 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 OR6B1O95007 311 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 VNN1O95497 513 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 CALB1P05937 261 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 AP2B1P63010 937 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 PTPN20Q4JDL3 420 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 FAM156AQ8NDB6 213 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 TUBGCP5Q96RT8 1024 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 PNPOQ9NVS9 261 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 HMGXB4Q9UGU5 601 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 ANGPTL2Q9UKU9 493 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 AKT3Q9Y243 479 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 PSTPIP1O43586 416 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 SUPT3HO75486 399 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 DGAT1O75907 488 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 HSPA4LO95757 839 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 NME3Q13232 169 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 ITGA9Q13797 1035 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 MORF4L2Q15014 288 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 LRRC23Q53EV4 343 aaPredicted RBP15.11■□□□□ 0.01
PTPN9-201ENST00000306726 TMEM192Q8IY95 271 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 XPNPEP1Q9NQW7 623 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 P4HA2O15460 535 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 DHX15O43143 795 aaKnown RBP15.11■□□□□ 0.01
PTPN9-201ENST00000306726 PGK2P07205 417 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 JAK3P52333 1124 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 CDK16Q00536 496 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 DPYSL3Q14195 570 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 ASRGL1Q7L266 308 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 CMC1Q7Z7K0 106 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 HPS6Q86YV9 775 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 WDR75Q8IWA0 830 aaKnown RBP15.11■□□□□ 0.01
PTPN9-201ENST00000306726 USP33Q8TEY7 942 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 CRYGNQ8WXF5 182 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 AZIN2Q96A70 460 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 CPB2Q96IY4 423 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 CPXM1Q96SM3 734 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 PRKAG3Q9UGI9 489 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 USP18Q9UMW8 372 aa15.11■□□□□ 0.01
PTPN9-201ENST00000306726 PYGLP06737 847 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 TPH1P17752 444 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 NME5P56597 212 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 DUOXA2Q1HG44 320 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 MPP5Q8N3R9 675 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 FAM49AQ9H0Q0 323 aaPredicted RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 V9GYQ6 96 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 CITO14578 2027 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 SPDYE16A6NNV3 312 aaPredicted RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 KCNK1O00180 336 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 GCAP28676 217 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 RNASEH2BQ5TBB1 312 aaKnown RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 SYDE1Q6ZW31 735 aaPredicted RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 RIBC1Q8N443 379 aaPredicted RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 MAB21L3Q8N8X9 362 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 OR6B3Q8NGW1 331 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 MAGEC3Q8TD91 643 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 RXFP2Q8WXD0 754 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 SEMA6AQ9H2E6 1030 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 IL1RL2Q9HB29 575 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 PXMP2Q9NR77 195 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 ZACNQ401N2 412 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 SLC45A4Q5BKX6 768 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 KATNAL2Q8IYT4 538 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 PIWIL1Q96J94 861 aaKnown RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 ZNF184Q99676 751 aaPredicted RBP15.1■□□□□ 0.01
PTPN9-201ENST00000306726 EBF3Q9H4W6 596 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 KCNG1Q9UIX4 513 aa15.1■□□□□ 0.01
PTPN9-201ENST00000306726 PARP14Q460N5 1801 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 CNTNAP2Q9UHC6 1331 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 MAPTP10636 758 aaKnown RBP15.09■□□□□ 0.01
PTPN9-201ENST00000306726 GJA5P36382 358 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 MCL1Q07820 350 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 FOXD4Q12950 439 aaPredicted RBP15.09■□□□□ 0.01
PTPN9-201ENST00000306726 MED21Q13503 144 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 FAM131BQ86XD5 332 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 RIOX2Q8IUF8 465 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 KBTBD2Q8IY47 623 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 B4GALNT2Q8NHY0 566 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms