RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ITPRIPL2Q3MIP1 535 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC44A4Q53GD3 710 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 EFHC1Q5JVL4 640 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FAM102AQ5T9C2 384 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SPECC1LQ69YQ0 1117 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TRIM68Q6AZZ1 485 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PPP1R2P3Q6NXS1 205 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 C1orf228Q6PIY5 440 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FAM183BPQ6ZVS7 135 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SUGP1Q8IWZ8 645 aaKnown RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 WDTC1Q8N5D0 677 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FLCNQ8NFG4 579 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RIN3Q8TB24 985 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CPA5Q8WXQ8 436 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PBXIP1Q96AQ6 731 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PLD4Q96BZ4 506 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 OTUB2Q96DC9 234 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ASIC4Q96FT7 647 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SERPINB11Q96P15 392 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 LRRC3BQ96PB8 259 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 AGPAT1Q99943 283 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KLF16Q9BXK1 252 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DCLK3Q9C098 648 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RBSNQ9H1K0 784 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 EBF3Q9H4W6 596 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 C8orf33Q9H7E9 229 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 POPDC2Q9HBU9 364 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ASNSD1Q9NWL6 643 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 AIPL1Q9NZN9 384 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZNF510Q9Y2H8 683 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MRPS17Q9Y2R5 130 aaKnown RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 LUC7L2Q9Y383 392 aaKnown RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PIAS3Q9Y6X2 628 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FAM170AA1A519 330 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KRBA1A5PL33 1030 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PRR33A8MZF0 331 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MAN2B1O00754 1011 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GPR37L1O60883 481 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DAB1O75553 588 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GABBR2O75899 941 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GYPCP04921 128 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GLULP15104 373 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ARSAP15289 507 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 YWHAZP63104 245 aaKnown RBP11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZXDBP98169 803 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TNK2Q07912 1038 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RUNX3Q13761 415 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 EML3Q32P44 896 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MSANTD2Q6P1R3 559 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZNF852Q6ZMS4 543 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TTC8Q8TAM2 541 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FAM83CQ9BQN1 747 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HAUS4Q9H6D7 363 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TBC1D17Q9HA65 648 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GTSE1Q9NYZ3 720 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SFMBT1Q9UHJ3 866 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CAPN11Q9UMQ6 739 aa11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HBS1LQ9Y450 684 aaKnown RBP11.49□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GOLGA8SH3BPF8 625 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ARNTLO00327 626 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SCAMP3O14828 347 aaKnown RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GRAP2O75791 330 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 STC2O76061 302 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ADH1CP00326 375 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CALB1P05937 261 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CHRNB2P17787 502 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CORO1AP31146 461 aaKnown RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CASP14P31944 242 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SCNN1AP37088 669 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PRKCIP41743 596 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GABRB2P47870 512 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HARS2P49590 506 aaKnown RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CDK17Q00537 523 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CENPCQ03188 943 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 UBXN2BQ14CS0 331 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CLEC16AQ2KHT3 1053 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DCAF6Q58WW2 860 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 OLFML1Q6UWY5 402 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MMS22LQ6ZRQ5 1243 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BEND5Q7L4P6 421 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC26A9Q7LBE3 791 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 IRF2BP2Q7Z5L9 587 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RALGPS2Q86X27 583 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 VSTM4Q8IW00 320 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BBS7Q8IWZ6 715 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FAM3CQ92520 227 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PIWIL1Q96J94 861 aaKnown RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ECT2Q9H8V3 914 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms