RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 BEND5Q7L4P6 421 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 TXLNBQ8N3L3 684 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 TRIM62Q9BVG3 475 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 ADAM33Q9BZ11 813 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 MDM4O15151 490 aa28.36■■■□□ 2.13
HDAC3-201ENST00000305264 PDGFRAP16234 1089 aa28.36■■■□□ 2.13
HDAC3-201ENST00000305264 TFE3P19532 575 aaPredicted RBP28.36■■■□□ 2.13
HDAC3-201ENST00000305264 TUBP50607 506 aa28.36■■■□□ 2.13
HDAC3-201ENST00000305264 ZNF252P-AS1Q0IIN9 211 aa28.36■■■□□ 2.13
HDAC3-201ENST00000305264 SLC22A12Q96S37 553 aa28.36■■■□□ 2.13
HDAC3-201ENST00000305264 A0A0A6YYK5 440 aaPredicted RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 ZNF197O14709 1029 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 COCHO43405 550 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 DEKP35659 375 aaKnown RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 TCEAL1Q15170 157 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 C10orf120Q5SQS8 335 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 OTUD1Q5VV17 481 aaPredicted RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 POTEHQ6S545 545 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 MAB21L3Q8N8X9 362 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 ADAM32Q8TC27 787 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 DQX1Q8TE96 717 aaKnown RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 RNF139Q8WU17 664 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 DDX23Q9BUQ8 820 aaKnown RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 LZTFL1Q9NQ48 299 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 BTNL10A8MVZ5 291 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 GPD1P21695 349 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 FSHRP23945 695 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 NOS2P35228 1153 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 RIPOR3Q96MK2 946 aa28.35■■■□□ 2.13
HDAC3-201ENST00000305264 TRMT1Q9NXH9 659 aaKnown RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 USP15Q9Y4E8 981 aaPredicted RBP28.35■■■□□ 2.13
HDAC3-201ENST00000305264 MACROD2A1Z1Q3 448 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 USP27XA6NNY8 438 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 BUB1O43683 1085 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 MTA2O94776 668 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 C15orf59Q2T9L4 293 aaPredicted RBP28.34■■■□□ 2.13
HDAC3-201ENST00000305264 CCDC14Q49A88 953 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 GPR158Q5T848 1215 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 GET4Q7L5D6 327 aaPredicted RBP28.34■■■□□ 2.13
HDAC3-201ENST00000305264 HLA-CQ95604 372 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 CYP2S1Q96SQ9 504 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 RNF38Q9H0F5 515 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 CALCOCO1Q9P1Z2 691 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 SFMBT1Q9UHJ3 866 aa28.34■■■□□ 2.13
HDAC3-201ENST00000305264 SDC4P31431 198 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 NOP2P46087 812 aaKnown RBP28.33■■■□□ 2.13
HDAC3-201ENST00000305264 ZNF143P52747 638 aaPredicted RBP28.33■■■□□ 2.13
HDAC3-201ENST00000305264 EFEMP1Q12805 493 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 MSANTD2Q6P1R3 559 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 TAC4Q86UU9 113 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 MAFAQ8NHW3 353 aaPredicted RBP28.33■■■□□ 2.13
HDAC3-201ENST00000305264 SLC46A2Q9BY10 475 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 TSGA10Q9BZW7 698 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 POMKQ9H5K3 350 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 UNC80Q8N2C7 3258 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 DOCK8Q8NF50 2099 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 MTHFRP42898 656 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 ATP11AP98196 1134 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 ARHGAP15Q53QZ3 475 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 SH3PXD2AQ5TCZ1 1133 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 REXO1L1PQ8IX06 675 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 ZNF276Q8N554 614 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 ARL14EPQ8N8R7 260 aaPredicted RBP28.33■■■□□ 2.13
HDAC3-201ENST00000305264 SUSD6Q92537 303 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 NT5C3BQ969T7 300 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 TBCBQ99426 244 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 NPY6RQ99463 290 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 SMOC2Q9H3U7 446 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 SLITRK6Q9H5Y7 841 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 STAP1Q9ULZ2 295 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 GUCA1BQ9UMX6 200 aa28.33■■■□□ 2.13
HDAC3-201ENST00000305264 GRXCR2A6NFK2 248 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 DPYSL4O14531 572 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 CCP110O43303 1012 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 MSI1O43347 362 aaKnown RBP28.32■■■□□ 2.12
HDAC3-201ENST00000305264 KRT86O43790 486 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 OLFM2O95897 454 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 SULT1E1P49888 294 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 CBX2Q14781 532 aaPredicted RBP28.32■■■□□ 2.12
HDAC3-201ENST00000305264 CDO1Q16878 200 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 SLC25A52Q3SY17 297 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 RAB6CQ53S08 254 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 ZNF662Q6ZS27 426 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 FNIP1Q8TF40 1166 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 CDK5RAP1Q96SZ6 601 aaKnown RBP28.32■■■□□ 2.12
HDAC3-201ENST00000305264 NACA2Q9H009 215 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 RAB6CQ9H0N0 254 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 OLA1Q9NTK5 396 aaKnown RBP28.32■■■□□ 2.12
HDAC3-201ENST00000305264 RASAL2Q9UJF2 1139 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 PAXBP1Q9Y5B6 917 aa28.32■■■□□ 2.12
HDAC3-201ENST00000305264 HELZP42694 1942 aaKnown RBP28.32■■■□□ 2.12
HDAC3-201ENST00000305264 ZSCAN12O43309 604 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 PSMA2P25787 234 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 ATP5C1P36542 298 aaKnown RBP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 PTPN9P43378 593 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 ARHGAP29Q52LW3 1261 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 MIB1Q86YT6 1006 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 NPAS3Q8IXF0 933 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 C17orf53Q8N3J3 647 aaPredicted RBP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 ZSWIM3Q96MP5 696 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms