RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 XKR3Q5GH77 459 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 B3GNT6Q6ZMB0 384 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 ZCCHC23Q6ZST2 131 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 TSHZ1Q6ZSZ6 1077 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 TMPRSS6Q8IU80 811 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 RHPN2Q8IUC4 686 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 PALM2Q8IXS6 379 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 DGCR14Q96DF8 476 aaKnown RBP8.24□□□□□ -1.09
NKRF-201ENST00000304449 ATG4CQ96DT6 458 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 VPS11Q9H270 941 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 RPAP3Q9H6T3 665 aaPredicted RBP8.24□□□□□ -1.09
NKRF-201ENST00000304449 ANLNQ9NQW6 1124 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 DDX56Q9NY93 547 aaKnown RBP8.24□□□□□ -1.09
NKRF-201ENST00000304449 FBXO40Q9UH90 709 aa8.24□□□□□ -1.09
NKRF-201ENST00000304449 TM9SF1O15321 606 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TPD52L2O43399 206 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 MSCO60682 206 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 HNRNPCL1O60812 293 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 TGDSO95455 350 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 EGFRP00533 1210 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 KRT1P04264 644 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CALB1P05937 261 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CDK4P11802 303 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 RPL22P35268 128 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 TNFSF9P41273 254 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 OAZ1P54368 228 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 AQP5P55064 265 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PDE1BQ01064 536 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 FOLH1Q04609 750 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 MTA1Q13330 715 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PPP6R3Q5H9R7 873 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 GRAMD4Q6IC98 578 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 SLFN12LQ6IEE8 588 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 BBS12Q6ZW61 710 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 ACAD11Q709F0 780 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 DHDDSQ86SQ9 333 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CHSY1Q86X52 802 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 ICA1LQ8NDH6 482 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 STKLD1Q8NE28 680 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CXorf38Q8TB03 319 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 FNIP1Q8TF40 1166 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PAFAH2Q99487 392 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TARS2Q9BW92 718 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 FRMD8P1Q9BZ68 369 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 VPS33BQ9H267 617 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 STK32BQ9NY57 414 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TJP2Q9UDY2 1190 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 SEPT9Q9UHD8 586 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 ADAMTS6Q9UKP5 1117 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 LZTS1Q9Y250 596 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 MTO1Q9Y2Z2 717 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 TRIM43BA6NCK2 446 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 A8MXQ7 604 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CYB561D2O14569 222 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 XPO1O14980 1071 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 LDHAP00338 332 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 C6orf222P0C671 652 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 UQCRBP14927 111 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PROZP22891 400 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 RGS2P41220 211 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CHN2P52757 468 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 FSTL1Q12841 308 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 HIC1Q14526 733 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TRMT5Q32P41 509 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 KBTBD12Q3ZCT8 623 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 DPY19L2Q6NUT2 758 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CENPUQ71F23 418 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 ZNF554Q86TJ5 538 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 BRSK2Q8IWQ3 736 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CMASQ8NFW8 434 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 ZFP28Q8NHY6 868 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PPP1R14CQ8TAE6 165 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TMEM143Q96AN5 459 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TUBB6Q9BUF5 446 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 MAF1Q9H063 256 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TUT1Q9H6E5 874 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 ZNF112Q9UJU3 913 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 SCAF8Q9UPN6 1271 aaKnown RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 ZSWIM8A7E2V4 1837 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 H3BSA7 217 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 I3L4J1 428 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 STAM2O75886 525 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CD48P09326 243 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 RAG1P15918 1043 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 KDELR1P24390 212 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 RFC1P35251 1148 aaPredicted RBP8.23□□□□□ -1.09
NKRF-201ENST00000304449 ACTR3P61158 418 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TAP1Q03518 808 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CAPSQ13938 189 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 C16orf72Q14CZ0 275 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PTPN20Q4JDL3 420 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 CIAPIN1Q6FI81 312 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 FBXL19Q6PCT2 694 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 DENND5BQ6ZUT9 1274 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 PCGF5Q86SE9 256 aa8.23□□□□□ -1.09
NKRF-201ENST00000304449 WDR49Q8IV35 697 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms