RNA–Protein interactions for RNA: ENST00000302946.12

SLFNL1-201, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 1,951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-201ENST00000302946 TRABD2AQ86V40 505 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 SCUBE3Q8IX30 993 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 ANKRD42Q8N9B4 389 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 OR6B3Q8NGW1 331 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 FAM172AQ8WUF8 416 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 TEKT4Q8WW24 435 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 CKAP2Q8WWK9 683 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 RNF157Q96PX1 679 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 VPS37BQ9H9H4 285 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 HESX1Q9UBX0 185 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 PCNTO95613 3336 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 SPTLC1O15269 473 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 VIMP08670 466 aaKnown RBP17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 NRLP54845 237 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 ROR1Q01973 937 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 TFDP2Q14188 446 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 ITIH4Q14624 930 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 ZC3H12AQ5D1E8 599 aaKnown RBP17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 CCDC121Q6ZUS5 278 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 ANKMY2Q8IV38 441 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 DBF4BQ8NFT6 615 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 DYDC1Q8WWB3 177 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 RSPH1Q8WYR4 309 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 MAK16Q9BXY0 300 aaKnown RBP17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 B3GNT5Q9BYG0 378 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
SLFNL1-201ENST00000302946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 A8MXQ7 604 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 RASA4BC9J798 803 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 RASA4O43374 803 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 HUS1O60921 280 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 CXCL10P02778 98 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 SDC4P31431 198 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 RPL34P49207 117 aaKnown RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 HDAC4P56524 1084 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 ARL4CP56559 192 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 LILRA4P59901 499 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 NR1H3Q13133 447 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 KRT81Q14533 505 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 PDK2Q15119 407 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 RASA2Q15283 850 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 BOLA3Q53S33 107 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 CAPN12Q6ZSI9 719 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 LIMS2Q7Z4I7 341 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 PACS2Q86VP3 889 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 ZDHHC17Q8IUH5 632 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 PQLC3Q8N755 202 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 APPL2Q8NEU8 664 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 DIS3LQ8TF46 1054 aaKnown RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 P3H4Q92791 437 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 C11orf84Q9BUA3 381 aaPredicted RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 SNRNP25Q9BV90 132 aaKnown RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 NSRP1Q9H0G5 558 aaKnown RBP17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 PCDH18Q9HCL0 1135 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
SLFNL1-201ENST00000302946 POC1B-GALNT4F8VUJ3 575 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 SMAPO00193 183 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 CCDC130P13994 396 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 RFC2P35250 354 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 ACTN3Q08043 901 aaPredicted RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TUSC3Q13454 348 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 CA9Q16790 459 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 EFHC2Q5JST6 749 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 CRYBG2Q8N1P7 616 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 PLD5Q8N7P1 536 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 CCT6BQ92526 530 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TBCBQ99426 244 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 PPCSQ9HAB8 311 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 MIOSQ9NXC5 875 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TBX21Q9UL17 535 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 ATP11BQ9Y2G3 1177 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TCP11X1B4DZS4 312 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 MDM4O15151 490 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 HOXA2O43364 376 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 CLTBP09497 229 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 LMO2P25791 158 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 STIP1P31948 543 aaKnown RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 SLC9A4Q6AI14 798 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 SCYL2Q6P3W7 929 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 DARS2Q6PI48 645 aaKnown RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 ARHGEF18Q6ZSZ5 1173 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 ZC3H18Q86VM9 953 aaKnown RBP17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 VSIG1Q86XK7 387 aa17.09■□□□□ 0.33
SLFNL1-201ENST00000302946 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms