RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CASD1Q96PB1 797 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 TMEM175Q9BSA9 504 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
TPM3-202ENST00000302206 ULBP1Q9BZM6 244 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
TPM3-202ENST00000302206 ANAPC5Q9UJX4 755 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 PLAAQ9Y263 795 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
TPM3-202ENST00000302206 PATJQ8NI35 1801 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 CFAP69A5D8W1 941 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 DCDC2CA8MYV0 355 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 SMAPO00193 183 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 DNALI1O14645 258 aaPredicted RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 MCF2LO15068 1137 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 B4GALT3O60512 393 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 RNF40O75150 1001 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 ZBED1O96006 694 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 ITGB1P05556 798 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 L1CAMP32004 1257 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 NDUFV1P49821 464 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 ITGA8P53708 1063 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 RAB6CQ53S08 254 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 ANKRD20A8PQ5CZ79 823 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 HIBCHQ6NVY1 386 aaPredicted RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 PCGF5Q86SE9 256 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 NPAS4Q8IUM7 802 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 RELL1Q8IUW5 271 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 DCP1BQ8IZD4 617 aaKnown RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 OR10T2Q8NGX3 314 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 UBLCP1Q8WVY7 318 aaPredicted RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 NTAN1Q96AB6 310 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 COLEC11Q9BWP8 271 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 OXCT2Q9BYC2 517 aaPredicted RBP12.49□□□□□ -0.41
TPM3-202ENST00000302206 PHACTR1Q9C0D0 580 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 ZCWPW1Q9H0M4 648 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 RAB6CQ9H0N0 254 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 FZD10Q9ULW2 581 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 USP3Q9Y6I4 520 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
TPM3-202ENST00000302206 NRP1O14786 923 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 APOL1O14791 398 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 POLR3GO15318 223 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 TADA2AO75478 443 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 ZNF189O75820 626 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 F9P00740 461 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 LTFP02788 710 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 TFE3P19532 575 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 IBSPP21815 317 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 OR1G1P47890 313 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 NR2C2P49116 596 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 ZNF135P52742 658 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 EIF3EP60228 445 aaKnown RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 DYNLT1P63172 113 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 SCAPQ12770 1279 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 ELAVL2Q12926 359 aaKnown RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 XRCC4Q13426 336 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 MORF4L2Q15014 288 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 NFE2Q16621 373 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 DCAF6Q58WW2 860 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 IZUMO3Q5VZ72 239 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 BHLHA9Q7RTU4 235 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 LRRTM3Q86VH5 581 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 SPATA2LQ8IUW3 424 aaPredicted RBP12.48□□□□□ -0.41
TPM3-202ENST00000302206 PQLC3Q8N755 202 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 PLD5Q8N7P1 536 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 P3H4Q92791 437 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 FUBP3Q96I24 572 aaKnown RBP eCLIP12.48□□□□□ -0.41
TPM3-202ENST00000302206 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 FAM118BQ9BPY3 351 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 TMEM109Q9BVC6 243 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 NRDE2Q9H7Z3 1164 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 TMEM30AQ9NV96 361 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 TMLHEQ9NVH6 421 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 AP4E1Q9UPM8 1137 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 SHOC2Q9UQ13 582 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 ATP8A1Q9Y2Q0 1164 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 PTPRDP23468 1912 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
TPM3-202ENST00000302206 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 OR6C75A6NL08 312 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 SGK1O00141 431 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms