RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TMBIM4Q9HC24 238 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 LRRC4CQ9HCJ2 640 aa23.2■■□□□ 1.3
SMAD1-201ENST00000302085 GOLGA6CA6NDK9 693 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 OR4Q2P0C623 313 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 GOLGA6DP0CG33 693 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 CYP2F1P24903 491 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 FAAP100Q0VG06 881 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 B4GALNT4Q76KP1 1039 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 PYROXD2Q8N2H3 581 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 HIPK3Q9H422 1215 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 GOLGA6AQ9NYA3 693 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 LRFN2Q9ULH4 789 aa23.19■■□□□ 1.3
SMAD1-201ENST00000302085 TPX2Q9ULW0 747 aaKnown RBP23.19■■□□□ 1.3
SMAD1-201ENST00000302085 SYNJ2BP-COX16A0A087WUM0 186 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 MCF2LO15068 1137 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 LTFP02788 710 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 NUDT17P0C025 328 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 RDXP35241 583 aaKnown RBP23.18■■□□□ 1.3
SMAD1-201ENST00000302085 SLC29A2Q14542 456 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 FAM43BQ6ZT52 329 aaPredicted RBP23.18■■□□□ 1.3
SMAD1-201ENST00000302085 RSAD2Q8WXG1 361 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 ZCWPW1Q9H0M4 648 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 TMPRSS4Q9NRS4 437 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 PIGVQ9NUD9 493 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 COX16Q9P0S2 106 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 SCN5AQ14524 2016 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 TRAPPC3O43617 180 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 CXCL10P02778 98 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 SHBGP04278 402 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 TGM2P21980 687 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 BCAR1P56945 870 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 TLE2Q04725 743 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 DEUP1Q05D60 604 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 NME3Q13232 169 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 ZC3H18Q86VM9 953 aaKnown RBP23.18■■□□□ 1.3
SMAD1-201ENST00000302085 SPATA2LQ8IUW3 424 aaPredicted RBP23.18■■□□□ 1.3
SMAD1-201ENST00000302085 CRISPLD2Q9H0B8 497 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 TSPYL1Q9H0U9 437 aa23.18■■□□□ 1.3
SMAD1-201ENST00000302085 DNAJC17Q9NVM6 304 aaKnown RBP23.18■■□□□ 1.3
SMAD1-201ENST00000302085 CWC15Q9P013 229 aaKnown RBP23.18■■□□□ 1.3
SMAD1-201ENST00000302085 NLRC5Q86WI3 1866 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 CAPN9O14815 690 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 RPL22P35268 128 aaKnown RBP23.17■■□□□ 1.3
SMAD1-201ENST00000302085 DENND2CQ68D51 928 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 KCTD16Q68DU8 428 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 DARS2Q6PI48 645 aaKnown RBP23.17■■□□□ 1.3
SMAD1-201ENST00000302085 TRMT10CQ7L0Y3 403 aaKnown RBP23.17■■□□□ 1.3
SMAD1-201ENST00000302085 PSTKQ8IV42 348 aaKnown RBP23.17■■□□□ 1.3
SMAD1-201ENST00000302085 SCML4Q8N228 414 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 FAM71DQ8N9W8 422 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 SLC7A14Q8TBB6 771 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 IRGQQ8WZA9 623 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 CSPG4P5Q96PW8 444 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 PPP1R12CQ9BZL4 782 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 WBP1LQ9NX94 342 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 HCSTQ9UBK5 93 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 USP3Q9Y6I4 520 aa23.17■■□□□ 1.3
SMAD1-201ENST00000302085 TTC3P53804 2025 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 DCDC2CA8MYV0 355 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 RIPK2O43353 540 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 NCAM1P13591 858 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 CYP2C18P33260 490 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 ROR1Q01973 937 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 TRIM60Q495X7 471 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 SLC39A12Q504Y0 691 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 RNASEH2BQ5TBB1 312 aaKnown RBP23.16■■□□□ 1.3
SMAD1-201ENST00000302085 C4orf50Q6ZRC1 276 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 SCAMP5Q8TAC9 235 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 ADAM32Q8TC27 787 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 PNPLA8Q9NP80 782 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 PRDM10Q9NQV6 1147 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 HEY1Q9Y5J3 304 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 PTPRDP23468 1912 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 ALDH2P05091 517 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 SLC11A1P49279 550 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 EIF3BP55884 814 aaKnown RBP23.16■■□□□ 1.3
SMAD1-201ENST00000302085 VARS2Q5ST30 1063 aaKnown RBP23.16■■□□□ 1.3
SMAD1-201ENST00000302085 ZCCHC9Q8N567 271 aaKnown RBP23.16■■□□□ 1.3
SMAD1-201ENST00000302085 SH2D3CQ8N5H7 860 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 EDEM1Q92611 657 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 CDC42EP4Q9H3Q1 356 aaKnown RBP23.16■■□□□ 1.3
SMAD1-201ENST00000302085 USP29Q9HBJ7 922 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 ADAM28Q9UKQ2 775 aa23.16■■□□□ 1.3
SMAD1-201ENST00000302085 H7C0C1 242 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 SYN3O14994 580 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 MYZAPP0CAP1 466 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 STIP1P31948 543 aaKnown RBP23.15■■□□□ 1.3
SMAD1-201ENST00000302085 ATP5OP48047 213 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 BSPRYQ5W0U4 402 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 NPAS4Q8IUM7 802 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 FAM76AQ8TAV0 307 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 EXOC4Q96A65 974 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 ATP6V1G3Q96LB4 118 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 TOX2Q96NM4 488 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 COLEC11Q9BWP8 271 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 GPR62Q9BZJ7 368 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 WDR6Q9NNW5 1121 aaKnown RBP23.15■■□□□ 1.3
SMAD1-201ENST00000302085 MARCH5Q9NX47 278 aa23.15■■□□□ 1.3
SMAD1-201ENST00000302085 GOT1P17174 413 aa23.14■■□□□ 1.3
SMAD1-201ENST00000302085 AMPD1P23109 780 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms