RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 TRIM16O95361 564 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 TTLL1O95922 423 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 RPS6KB1P23443 525 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 GRIK1P39086 918 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 NOVP48745 357 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 CASP9P55211 416 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 DUSP4Q13115 394 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 SPARCL1Q14515 664 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 SQLEQ14534 574 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 NCAPHQ15003 741 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 ALX1Q15699 326 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 CCL14Q16627 93 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 QPCTQ16769 361 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 TRIM65Q6PJ69 517 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 RAB11FIP2Q7L804 512 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 TMPRSS9Q7Z410 1059 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 KRT73Q86Y46 540 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 SIAH1Q8IUQ4 282 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 TMTC1Q8IUR5 882 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 PLD6Q8N2A8 252 aaKnown RBP4.82□□□□□ -1.64
ZNF560-201ENST00000301480 DEFB123Q8N688 67 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 MFSD2AQ8NA29 543 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 KLHDC9Q8NEP7 349 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 FBXO22Q8NEZ5 403 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 ST13P5Q8NFI4 369 aaPredicted RBP4.82□□□□□ -1.64
ZNF560-201ENST00000301480 TSPEARQ8WU66 669 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 EXOC2Q96KP1 924 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 FBXL18Q96ME1 805 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 CDK5RAP1Q96SZ6 601 aaKnown RBP4.82□□□□□ -1.64
ZNF560-201ENST00000301480 HGH1Q9BTY7 390 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 FRMD8P1Q9BZ68 369 aaPredicted RBP4.82□□□□□ -1.64
ZNF560-201ENST00000301480 KLHL4Q9C0H6 718 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 MKNK2Q9HBH9 465 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 MBD2Q9UBB5 411 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 SEPT3Q9UH03 358 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 ZNF214Q9UL59 606 aaPredicted RBP4.82□□□□□ -1.64
ZNF560-201ENST00000301480 SLC39A10Q9ULF5 831 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
ZNF560-201ENST00000301480 LRRD1A4D1F6 860 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SH3D21A4FU49 640 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 PDPK1O15530 556 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 MEFVO15553 781 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 DOK2O60496 412 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 DNAJC8O75937 253 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 PFKMP08237 780 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SNRPAP09012 282 aaKnown RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 ZNF865P0CJ78 1059 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 PF4V1P10720 104 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CHN1P15882 459 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CNTFP26441 200 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CCR1P32246 355 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 DSC2Q02487 901 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SPAG1Q07617 926 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SLC14A1Q13336 389 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 PPIGQ13427 754 aaKnown RBP eCLIP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 TMEM132BQ14DG7 1078 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 EFTUD2Q15029 972 aaKnown RBP eCLIP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 C8orf34Q49A92 452 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 C5orf22Q49AR2 442 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 XKR9Q5GH70 373 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 PPP6R3Q5H9R7 873 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SARM1Q6SZW1 724 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 LRIG3Q6UXM1 1119 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 KDM7AQ6ZMT4 941 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 FAM186BQ8IYM0 893 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SLFN12Q8IYM2 578 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SYCE1Q8N0S2 351 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CAMKK1Q8N5S9 505 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 NIPA2Q8N8Q9 360 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 OR6S1Q8NH40 331 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 IFI44Q8TCB0 444 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 ZNF507Q8TCN5 953 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CHAC2Q8WUX2 184 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SLC22A18Q96BI1 424 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 EFHD2Q96C19 240 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 ART5Q96L15 291 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 UBXN10Q96LJ8 280 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 AK8Q96MA6 479 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 TMEM68Q96MH6 324 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 RPRD1AQ96P16 312 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 LENG8Q96PV6 779 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 WACQ9BTA9 647 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 FRMD8Q9BZ67 464 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 ARMT1Q9H993 441 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 UCK1Q9HA47 277 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SLC38A10Q9HBR0 1119 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 IL1RAPL2Q9NP60 686 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 XPNPEP3Q9NQH7 507 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 FLRT1Q9NZU1 646 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
ZNF560-201ENST00000301480 SALL4Q9UJQ4 1053 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CDC23Q9UJX2 597 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 TNNQ9UQP3 1299 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 GIT1Q9Y2X7 761 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 PCDHGA8Q9Y5G5 932 aa4.81□□□□□ -1.64
ZNF560-201ENST00000301480 CAPN7Q9Y6W3 813 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms