RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 MAD1L1Q9Y6D9 718 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 C2CD2LO14523 706 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 CHADO15335 359 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 UPP2O95045 317 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 METTL18O95568 372 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 ETV4P43268 484 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 NEK3P51956 506 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 TRMT10BQ6PF06 316 aaKnown RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 MAMDC4Q6UXC1 1216 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 SH2D5Q6ZV89 423 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 OR6B3Q8NGW1 331 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 LBHD1Q9BQE6 289 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 APOL6Q9BWW8 343 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 FAM49AQ9H0Q0 323 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 DHX35Q9H5Z1 703 aaKnown RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 ZNF395Q9H8N7 513 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 ETNK2Q9NVF9 386 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 PAK5Q9P286 719 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 MYO18AQ92614 2054 aaKnown RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 H3BRB1 525 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 C1QAP02745 245 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 GNAZP19086 355 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 OSBPP22059 807 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 ADORA2BP29275 332 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 SLC6A3Q01959 620 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 LAMC2Q13753 1193 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 BOLA3Q53S33 107 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 SLC45A4Q5BKX6 768 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 ALKBH8Q96BT7 664 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 NAF1Q96HR8 494 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 EIF2AQ9BY44 585 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 MROH8Q9H579 483 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 TUT1Q9H6E5 874 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 PIH1D1Q9NWS0 290 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 C2CD2Q9Y426 696 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CCDC195A0A1B0GUA6 201 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 ENO4A6NNW6 628 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 H0Y3Z8 333 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 PEX11AO75192 247 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 TOP3BO95985 862 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 LCP1P13796 627 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CCDC130P13994 396 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CYP2F1P24903 491 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 SERPINB3P29508 390 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CTC1Q2NKJ3 1217 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 TTC7BQ86TV6 843 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 SLC26A11Q86WA9 606 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 NDRG1Q92597 394 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CDCA5Q96FF9 252 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
HIF3A-204ENST00000300862 OSBPL1AQ9BXW6 950 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 ARL8BQ9NVJ2 186 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 GJD2Q9UKL4 321 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 CITO14578 2027 aa13.38□□□□□ -0.27
HIF3A-204ENST00000300862 ASB14A6NK59 587 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 SMAPO00193 183 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 CYB561D2O14569 222 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ATP5HO75947 161 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 LUC7L3O95232 432 aaKnown RBP13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ADORA2AP29274 412 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 GJA5P36382 358 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 SERPINB4P48594 390 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 PDK2Q15119 407 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 MARCH8Q5T0T0 291 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 PYROXD2Q8N2H3 581 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 TTC8Q8TAM2 541 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 SLC35F5Q8WV83 523 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 MIPEPQ99797 713 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 TMEM120AQ9BXJ8 343 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 KLC2Q9H0B6 622 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 SETD4Q9NVD3 440 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ZFATQ9P243 1243 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 FAM237BA0A1B0GVD1 139 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 COPEO14579 308 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ENTPD5O75356 428 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 DHRS4L1P0CG22 281 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 CSH1P0DML2 217 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 CSH2P0DML3 217 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ARFIP2P53365 341 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ZBTB16Q05516 673 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 SLC18A2Q05940 514 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 POU5F1BQ06416 359 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 PARP6Q2NL67 630 aa13.37□□□□□ -0.27
HIF3A-204ENST00000300862 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms