RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ZBED1O96006 694 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 GHRP10912 638 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ELK3P41970 407 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CAV1Q03135 178 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 RNASEH2BQ5TBB1 312 aaKnown RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ISLR2Q6UXK2 745 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 IGDCC3Q8IVU1 814 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 TTC8Q8TAM2 541 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 SLCO2A1Q92959 643 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 SMC6Q96SB8 1091 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 DDX50Q9BQ39 737 aaKnown RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 DCTN4Q9UJW0 460 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 IKBKGQ9Y6K9 419 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CCDC78A2IDD5 438 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 C5orf60A6NFR6 353 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CFAP73A6NFT4 308 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PAPSS1O43252 624 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PAEPP09466 180 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 FGFR1P11362 822 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 NAT1P18440 290 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ATP5DP30049 168 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 GNL1P36915 607 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 TAP1Q03518 808 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 GBE1Q04446 702 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 SOX4Q06945 474 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 SOWAHAQ2M3V2 549 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CCDC14Q49A88 953 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 DCAF6Q58WW2 860 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PDIK1LQ8N165 341 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 C2orf69Q8N8R5 385 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 BEST2Q8NFU1 509 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 SNRNP25Q9BV90 132 aaKnown RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 IL1RAPL1Q9NZN1 696 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CITO14578 2027 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PGK1P00558 417 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 NDUFV1P49821 464 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ARL4CP56559 192 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ZNF268Q14587 947 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PPP2R5DQ14738 602 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ZRSR2Q15696 482 aaKnown RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 NOTUMQ6P988 496 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 SLC27A1Q6PCB7 646 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 APBB1IPQ7Z5R6 666 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 NME8Q8N427 588 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PPM1NQ8N819 430 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CCNYQ8ND76 341 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 CNPY3Q9BT09 278 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PITPNM3Q9BZ71 974 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ROPN1BQ9BZX4 212 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 LHX5Q9H2C1 402 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 ROPN1Q9HAT0 212 aaPredicted RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 PCDH9Q9HC56 1237 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 DNAAF2Q9NVR5 837 aaKnown RBP10.49□□□□□ -0.73
FOXN4-201ENST00000299162 TTLL3Q9Y4R7 772 aa10.49□□□□□ -0.73
FOXN4-201ENST00000299162 IQCA1LA6NCM1 817 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 CBX6O95503 412 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 PFKMP08237 780 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 FOXN2P32314 431 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ZNF157P51786 506 aaPredicted RBP10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ZNF143P52747 638 aaPredicted RBP10.48□□□□□ -0.73
FOXN4-201ENST00000299162 GPX6P59796 221 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 STAT4Q14765 748 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 BBS12Q6ZW61 710 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 MFN1Q8IWA4 741 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 CXorf38Q8TB03 319 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 SLC35B2Q8TB61 432 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 CCHCR1Q8TD31 782 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 MAGEC3Q8TD91 643 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 UCMAQ8WVF2 138 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ITGA11Q9UKX5 1188 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 INPP5FQ9Y2H2 1132 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 MGAMO43451 1857 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 A6NJR5 290 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 C2CD4BA6NLJ0 364 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 KBTBD13C9JR72 458 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ZCCHC18P0CG32 403 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 AMPD1P23109 780 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 EPHB2P29323 1055 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 GRIA1P42261 906 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 WDR4P57081 412 aaKnown RBP10.48□□□□□ -0.73
FOXN4-201ENST00000299162 BMPR2Q13873 1038 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 DPYSL3Q14195 570 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 MFSD10Q14728 455 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 FBXO47Q5MNV8 452 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 CXCL17Q6UXB2 119 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 PPIL6Q8IXY8 311 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ZC3H15Q8WU90 426 aaKnown RBP10.48□□□□□ -0.73
FOXN4-201ENST00000299162 PAFAH2Q99487 392 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 CLUHO75153 1309 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 SMIM28A0A1B0GU29 152 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 CASTOR2A6NHX0 329 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ITGAVP06756 1048 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 UBTFL6P0CB48 400 aaPredicted RBP10.48□□□□□ -0.73
FOXN4-201ENST00000299162 ADIGQ0VDE8 80 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 RCN2Q14257 317 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 MORF4L2Q15014 288 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 SETDB1Q15047 1291 aa10.48□□□□□ -0.73
FOXN4-201ENST00000299162 SLC1A5Q15758 541 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms