RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CNTN6Q9UQ52 1028 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 ZZEF1O43149 2961 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 DENND4CQ5VZ89 1909 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 BCLAF3A2AJT9 711 aaKnown RBP22.18■■□□□ 1.14
SMCO4-201ENST00000298966 TMEM8BA6NDV4 472 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 KRT19P08727 400 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 AVPR1AP37288 418 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 SLC18A3Q16572 532 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 FBXO43Q4G163 708 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 ZNF677Q86XU0 584 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 CXorf38Q8TB03 319 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 SENP8Q96LD8 212 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 DESI2Q9BSY9 194 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 ADAM33Q9BZ11 813 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 HAUS4Q9H6D7 363 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 POLR3BQ9NW08 1133 aaPredicted RBP22.18■■□□□ 1.14
SMCO4-201ENST00000298966 LAMA1P25391 3075 aa22.18■■□□□ 1.14
SMCO4-201ENST00000298966 APBB3O95704 486 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 GBP1P32455 592 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 GUCY2FP51841 1108 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 SLC39A12Q504Y0 691 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 SH3PXD2AQ5TCZ1 1133 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 TRIM68Q6AZZ1 485 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 CC2D1AQ6P1N0 951 aaPredicted RBP22.17■■□□□ 1.14
SMCO4-201ENST00000298966 KIF9Q9HAQ2 790 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 APOBEC3GQ9HC16 384 aaKnown RBP22.17■■□□□ 1.14
SMCO4-201ENST00000298966 PKD1L2Q7Z442 2459 aa22.17■■□□□ 1.14
SMCO4-201ENST00000298966 DCLK1O15075 740 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 CLSTN1O94985 981 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 HOXB3P14651 431 aaPredicted RBP22.16■■□□□ 1.14
SMCO4-201ENST00000298966 ATF6P18850 670 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 POLR2BP30876 1174 aaKnown RBP22.16■■□□□ 1.14
SMCO4-201ENST00000298966 GALK1P51570 392 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 ARID5AQ03989 594 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 PTK2Q05397 1052 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 ACAP1Q15027 740 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 SYT13Q7L8C5 426 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 OR10T2Q8NGX3 314 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 GIPC2Q8TF65 315 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 ACDQ96AP0 544 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 CHFRQ96EP1 664 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 HPDLQ96IR7 371 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 P2RY13Q9BPV8 354 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 TSGA10Q9BZW7 698 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 DNAI2Q9GZS0 605 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 AGAP1Q9UPQ3 857 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 ABCA7Q8IZY2 2146 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 THADAQ6YHU6 1953 aa22.16■■□□□ 1.14
SMCO4-201ENST00000298966 LNP1A1A4G5 178 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 ANO9A1A5B4 782 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 OTOL1A6NHN0 477 aaPredicted RBP22.15■■□□□ 1.14
SMCO4-201ENST00000298966 PPEF2O14830 753 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 FAM163BP0C2L3 166 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 SPINK2P20155 84 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 PDE6CP51160 858 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 LILRA4P59901 499 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 PPP1R2P3Q6NXS1 205 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 C11orf74Q86VG3 221 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 UBR7Q8N806 425 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 MAB21L3Q8N8X9 362 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 ACRBPQ8NEB7 543 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 RPLP0P6Q8NHW5 317 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 C16orf45Q96MC5 204 aaPredicted RBP22.15■■□□□ 1.14
SMCO4-201ENST00000298966 FBRSL1Q9HCM7 1045 aaKnown RBP22.15■■□□□ 1.14
SMCO4-201ENST00000298966 TMEM9BQ9NQ34 198 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 TDP1Q9NUW8 608 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 EBF1Q9UH73 591 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 CCL26Q9Y258 94 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 REXO2Q9Y3B8 237 aaKnown RBP22.15■■□□□ 1.14
SMCO4-201ENST00000298966 TSC2P49815 1807 aa22.15■■□□□ 1.14
SMCO4-201ENST00000298966 KHNYNO15037 678 aaKnown RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 PLEKP08567 350 aaPredicted RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 CEACAM1P13688 526 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 ARSAP15289 507 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 CSRP1P21291 193 aaKnown RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 ACO1P21399 889 aaKnown RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 DDX6P26196 483 aaKnown RBP eCLIP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 TNNC1P63316 161 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 DMC1Q14565 340 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 PDGFRLQ15198 375 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 SPOPLQ6IQ16 392 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 METTL23Q86XA0 190 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 C2orf15Q8WU43 125 aaKnown RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 KAT5Q92993 513 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 USP13Q92995 863 aaPredicted RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 FAM84AQ96KN4 292 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 TMEM121BQ9BXQ6 578 aaPredicted RBP22.14■■□□□ 1.13
SMCO4-201ENST00000298966 ZCWPW1Q9H0M4 648 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 DSEQ9UL01 958 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 WASF3Q9UPY6 502 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 SCN1AP35498 2009 aa22.14■■□□□ 1.13
SMCO4-201ENST00000298966 PIRO00625 290 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 CYP11A1P05108 521 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 KRT5P13647 590 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 TNNT1P13805 278 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 USP8P40818 1118 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 ASPAP45381 313 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 DGKEP52429 567 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 VAV2P52735 878 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 WDR72Q3MJ13 1102 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms