RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CASD1Q96PB1 797 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 DHX35Q9H5Z1 703 aaKnown RBP14.84□□□□□ -0.03
C9orf3-202ENST00000297979 PCDH9Q9HC56 1237 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 SCN5AQ14524 2016 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 YJEFN3A6XGL0 299 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 E7ENQ6 273 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 H0YGN5 161 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 APOL1O14791 398 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 ZBED1O96006 694 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 USP17L7P0C7H9 530 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 RDXP35241 583 aaKnown RBP14.84□□□□□ -0.03
C9orf3-202ENST00000297979 EIF3EP60228 445 aaKnown RBP14.84□□□□□ -0.03
C9orf3-202ENST00000297979 NOMO1Q15155 1222 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 P3H1Q32P28 736 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 PPP6R3Q5H9R7 873 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-202ENST00000297979 C4orf50Q6ZRC1 276 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 BNIPLQ7Z465 357 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 SPATA2LQ8IUW3 424 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-202ENST00000297979 P3H4Q92791 437 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 FAF2Q96CS3 445 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 PABPC3Q9H361 631 aaKnown RBP14.84□□□□□ -0.03
C9orf3-202ENST00000297979 PNPLA8Q9NP80 782 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 NFS1Q9Y697 457 aa14.84□□□□□ -0.03
C9orf3-202ENST00000297979 PATJQ8NI35 1801 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 DCDC2CA8MYV0 355 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 CAPN9O14815 690 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 HOXA2O43364 376 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 TADA2AO75478 443 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 OAZ2O95190 189 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 PARNO95453 639 aaKnown RBP14.83□□□□□ -0.04
C9orf3-202ENST00000297979 ZSCAN5DPP0CG00 497 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 TGM2P21980 687 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 L1CAMP32004 1257 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 PITX1P78337 314 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-202ENST00000297979 CEP85LQ5SZL2 805 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 SYPL2Q5VXT5 272 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 FAM131BQ86XD5 332 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 NRDE2Q9H7Z3 1164 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 M0QYT0 321 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 IFNB1P01574 187 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 CXCL10P02778 98 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 LTFP02788 710 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 FYNP06241 537 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 RARGP13631 454 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 ETS1P14921 441 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-202ENST00000297979 GATMP50440 423 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 CCL23P55773 120 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 SLC9A4Q6AI14 798 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 NPNTQ6UXI9 565 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 CCDC25Q86WR0 208 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 PSTKQ8IV42 348 aaKnown RBP14.83□□□□□ -0.04
C9orf3-202ENST00000297979 PQLC3Q8N755 202 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 TET1Q8NFU7 2136 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 PCDH19Q8TAB3 1148 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 IRGQQ8WZA9 623 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 CRISPLD2Q9H0B8 497 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 NAALADL1Q9UQQ1 740 aa14.83□□□□□ -0.04
C9orf3-202ENST00000297979 DNALI1O14645 258 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-202ENST00000297979 SYN3O14994 580 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 RBP3P10745 1247 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 GYS2P54840 703 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 FAAP100Q0VG06 881 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 GPS1Q13098 491 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 HIBCHQ6NVY1 386 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-202ENST00000297979 NPAS4Q8IUM7 802 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 SCML4Q8N228 414 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 MICALL1Q8N3F8 863 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 PLD5Q8N7P1 536 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 OR2W6PQ8NHA6 318 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 RSAD2Q8WXG1 361 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 KCTD15Q96SI1 283 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-202ENST00000297979 PPP1R12CQ9BZL4 782 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 EPB41L4BQ9H329 900 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 WBP1LQ9NX94 342 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 ADAM28Q9UKQ2 775 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 FZD10Q9ULW2 581 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 TTC3P53804 2025 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-202ENST00000297979 CYP2F1P24903 491 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 DEUP1Q05D60 604 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 ZNF844Q08AG5 666 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 TRIM60Q495X7 471 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 TTMPQ5BVD1 217 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 DENND2CQ68D51 928 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 C1orf228Q6PIY5 440 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 BHLHA9Q7RTU4 235 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 DCP1BQ8IZD4 617 aaKnown RBP14.82□□□□□ -0.04
C9orf3-202ENST00000297979 ARL8AQ96BM9 186 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 MRPL9Q9BYD2 267 aaKnown RBP14.82□□□□□ -0.04
C9orf3-202ENST00000297979 ZCWPW1Q9H0M4 648 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 FAM204AQ9H8W3 233 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 AAASQ9NRG9 546 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 MTMR10Q9NXD2 777 aa14.82□□□□□ -0.04
C9orf3-202ENST00000297979 SYNJ2BP-COX16A0A087WUM0 186 aa14.81□□□□□ -0.04
C9orf3-202ENST00000297979 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
C9orf3-202ENST00000297979 NDC80O14777 642 aa14.81□□□□□ -0.04
C9orf3-202ENST00000297979 OR4Q2P0C623 313 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms