RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 HOXA10P31260 410 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SOX11P35716 441 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SKP1P63208 163 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 HIC1Q14526 733 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 TOMM20Q15388 145 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 C16orf89Q6UX73 402 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 IFNEQ86WN2 208 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 COPS5Q92905 334 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ATP6V1G3Q96LB4 118 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SYT17Q9BSW7 474 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 EXO5Q9H790 373 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 PADI4Q9UM07 663 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SDR42E2A6NKP2 422 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 TRPC5OSA6NMA1 111 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 FOXN3O00409 490 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 RECQL4O94761 1208 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ELNP15502 786 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SERPINB4P48594 390 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 PPIGQ13427 754 aaKnown RBP eCLIP7.13□□□□□ -1.272e-6■□□□□ 10.8
GAPVD1-202ENST00000297933 MTM1Q13496 603 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 PGS1Q32NB8 556 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 TFDP3Q5H9I0 405 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ANO5Q75V66 913 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ANKRD23Q86SG2 305 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 CCNJLQ8IV13 435 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SLC44A2Q8IWA5 706 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ZFPM1Q8IX07 1006 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 C4orf33Q8N1A6 199 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 EXD1Q8NHP7 514 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 FAM136AQ96C01 138 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 CELF6Q96J87 481 aaKnown RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 LRRC40Q9H9A6 602 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ARHGAP23Q9P227 1491 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SUPT7LO94864 414 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 AGTP01019 485 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ITGB6P18564 788 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 MAP2K2P36507 400 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 PSMC6P62333 389 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 MTF1Q14872 753 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 CBWD3Q5JTY5 395 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 CBWD5Q5RIA9 395 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 IFNLR1Q8IU57 520 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 CCDC60Q8IWA6 550 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ICA1LQ8NDH6 482 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 PPP1R13LQ8WUF5 828 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 RUBCNQ92622 972 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SLC5A5Q92911 643 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 DNAJC1Q96KC8 554 aaKnown RBP7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 SENP8Q96LD8 212 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 ABCC13Q9NSE7 274 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 TMEM51Q9NW97 253 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 AHSPQ9NZD4 102 aa7.13□□□□□ -1.27
GAPVD1-202ENST00000297933 GAKO14976 1311 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 HNRNPRO43390 633 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CYTH3O43739 400 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 TBC1D4O60343 1298 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 PNMA6AP0CW24 399 aaPredicted RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CCDC130P13994 396 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 FDPSP14324 419 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 UBA1P22314 1058 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CYP2F1P24903 491 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 COILP38432 576 aaPredicted RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 MARSP56192 900 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 GALNTL6Q49A17 601 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 C2CD6Q53TS8 623 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 RARS2Q5T160 578 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 HECTD3Q5T447 861 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 USP45Q70EL2 814 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 JAMLQ86YT9 394 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 RPTORQ8N122 1335 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CLEC4FQ8N1N0 589 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 SLC2A14Q8TDB8 520 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 MAGED4Q96JG8 741 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 ZNF333Q96JL9 665 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 PRMT1Q99873 361 aaKnown RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 IL1RL2Q9HB29 575 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 ZSCAN32Q9NX65 697 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 UBA2Q9UBT2 640 aaPredicted RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 MARCOQ9UEW3 520 aaPredicted RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 DNMT3LQ9UJW3 386 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 VWDEQ8N2E2 1590 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 USP17L7P0C7H9 530 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 HDCP19113 662 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 SERPINB8P50452 374 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 KDSRQ06136 332 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 NR1I3Q14994 352 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 ZPBP2Q6X784 338 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 PTAR1Q7Z6K3 402 aaPredicted RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 TAS1R2Q8TE23 839 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CCDC126Q96EE4 140 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 LRRC1Q9BTT6 524 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 INTS13Q9NVM9 706 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CDH16O75309 829 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 FGF19O95750 216 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 GLUD1P00367 558 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 SERPINA13PQ6UXR4 307 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 RFX8Q6ZV50 586 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 CASP10Q92851 521 aa7.12□□□□□ -1.27
GAPVD1-202ENST00000297933 ADNPQ9H2P0 1102 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms