RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 HOXC6P09630 235 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CXCL8P10145 99 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PIGHQ14442 188 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 HSDL1Q3SXM5 330 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 C3orf62Q6ZUJ4 267 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 NET1Q7Z628 596 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PYROXD1Q8WU10 500 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CLPTM1LQ96KA5 538 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 TWNKQ96RR1 684 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CALN1Q9BXU9 219 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 INO80BQ9C086 356 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PSMC3IPQ9P2W1 217 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 LCTP09848 1927 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 SOWAHBA6NEL2 793 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 TMEM63AO94886 807 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 RPL22P35268 128 aaKnown RBP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 BASP1P80723 227 aaKnown RBP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 SLC25A11Q02978 314 aaKnown RBP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 MMRN1Q13201 1228 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 NOL9Q5SY16 702 aaKnown RBP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 C6orf163Q5TEZ5 329 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 OLFML2BQ68BL8 750 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 RAPH1Q70E73 1250 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 FBXO36Q8NEA4 188 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 SLC35B2Q8TB61 432 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 TCP10LQ8TDR4 215 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 XYLT2Q9H1B5 865 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 TMEM134Q9H6X4 195 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 CIB2O75838 187 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 ERBB2P04626 1255 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 ITGAVP06756 1048 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 CCDC166P0CW27 439 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 RFX6Q8HWS3 928 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 SCUBE1Q8IWY4 988 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 RSAD2Q8WXG1 361 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 NKD2Q969F2 451 aaPredicted RBP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 DNAJC1Q96KC8 554 aaKnown RBP16.17■□□□□ 0.18
UBAP1-201ENST00000297661 PTPN18Q99952 460 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 FOXP3Q9BZS1 431 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 SDCBP2Q9H190 292 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 SMYD3Q9H7B4 428 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 PCDH9Q9HC56 1237 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 RABGEF1Q9UJ41 708 aa16.17■□□□□ 0.18
UBAP1-201ENST00000297661 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 OGTO15294 1046 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 GRAP2O75791 330 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 LSM8O95777 96 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 ACTR3P61158 418 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 TRMT5Q32P41 509 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 DRICH1Q6PGQ1 229 aaPredicted RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 RASSF3Q86WH2 238 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 TMPRSS6Q8IU80 811 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 OXNAD1Q96HP4 312 aaPredicted RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 NMUR2Q9GZQ4 415 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 GINM1Q9NU53 330 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 SLC17A7Q9P2U7 560 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 CPSF3Q9UKF6 684 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 DRG1Q9Y295 367 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 CCL15-CCL14A0A0B4J2E2 113 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 SMIM31A0A1B0GVY4 71 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 BUD23O43709 281 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 AVILO75366 819 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 MAFO75444 373 aaPredicted RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 DLDP09622 509 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 ABCD1P33897 745 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 CLCN3P51790 818 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 ARL4CP56559 192 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 SFSWAPQ12872 951 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 MED21Q13503 144 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 HNRNPDQ14103 355 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 RASA2Q15283 850 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 CCL15Q16663 113 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 LRRC38Q5VT99 294 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 IGDCC3Q8IVU1 814 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 KCTD6Q8NC69 237 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 RBM15BQ8NDT2 890 aaKnown RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 OR6Y1Q8NGX8 325 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 UBA3Q8TBC4 463 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 C12orf42Q96LP6 360 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 PAFAH2Q99487 392 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 MINDY3Q9H8M7 445 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 CIDEBQ9UHD4 219 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 SLC24A2Q9UI40 661 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 FARP1Q9Y4F1 1045 aaPredicted RBP16.16■□□□□ 0.18
UBAP1-201ENST00000297661 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
UBAP1-201ENST00000297661 C19orf81C9J6K1 198 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ATP2A1O14983 1001 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ATP9BO43861 1147 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 NFICP08651 508 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 CYP2C8P10632 490 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 MYL2P10916 166 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 KDELR1P24390 212 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 LRRC36Q1X8D7 754 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 ULK2Q8IYT8 1036 aa16.15■□□□□ 0.18
UBAP1-201ENST00000297661 SLC25A41Q8N5S1 370 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms