RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 LBX1P52954 281 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
LSM6-201ENST00000296581 KRT81Q14533 505 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 DPYSL2Q16555 572 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 CA9Q16790 459 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 SYPL2Q5VXT5 272 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 TSEN2Q8NCE0 465 aaKnown RBP16.19■□□□□ 0.18
LSM6-201ENST00000296581 FAF2Q96CS3 445 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 FAM129AQ9BZQ8 928 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 GPATCH2LQ9NWQ4 482 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 APOC4-APOC2K7ER74 178 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 DGKIO75912 1065 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 APOC2P02655 101 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 HSPA9P38646 679 aaKnown RBP16.19■□□□□ 0.18
LSM6-201ENST00000296581 PITX1P78337 314 aaPredicted RBP16.19■□□□□ 0.18
LSM6-201ENST00000296581 MMRN1Q13201 1228 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 TFDP2Q14188 446 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 CTXN3Q4LDR2 81 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 ZNF280DQ6N043 979 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 PSTKQ8IV42 348 aaKnown RBP16.19■□□□□ 0.18
LSM6-201ENST00000296581 ACTL9Q8TC94 416 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 RNF157Q96PX1 679 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 ZNF670Q9BS34 389 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 ACBD3Q9H3P7 528 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 RRN3Q9NYV6 651 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 NAALADL1Q9UQQ1 740 aa16.19■□□□□ 0.18
LSM6-201ENST00000296581 ABHD14A-ACY1A0A1B0GW23 586 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 TNFRSF10BO14763 440 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 KIAA0355O15063 1070 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 EFEMP2O95967 443 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 TIMP1P01033 207 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 ITGAVP06756 1048 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 CYP2F1P24903 491 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 IVDP26440 423 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
LSM6-201ENST00000296581 DYNLT1P63172 113 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 BEND5Q7L4P6 421 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 CCDC185Q8N715 623 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 HAUS1Q96CS2 278 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 WHRNQ9P202 907 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 AP4E1Q9UPM8 1137 aa16.18■□□□□ 0.18
LSM6-201ENST00000296581 TBC1D4O60343 1298 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 L1CAMP32004 1257 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 OTUD4Q01804 1114 aaKnown RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 VSTM1Q6UX27 236 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 NECAB2Q7Z6G3 386 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 TMEM173Q86WV6 379 aaPredicted RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 ALLCQ8N6M5 410 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 BCL7CQ8WUZ0 217 aaPredicted RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 ART4Q93070 314 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 PGAP3Q96FM1 320 aaPredicted RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 FMO2Q99518 471 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 MAK16Q9BXY0 300 aaKnown RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 CWH43Q9H720 699 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 MTMR10Q9NXD2 777 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 FZD10Q9ULW2 581 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 KIAA0100Q14667 2235 aaKnown RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 NT5C1B-RDH14C9J2C7 533 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 M0QYT0 321 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 CAPN9O14815 690 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 UPP2O95045 317 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 ITGB8P26012 769 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 KLRC2P26717 231 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 GRIK1P39086 918 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 MAGEA11P43364 429 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 ANKRD20A8PQ5CZ79 823 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 SLC9A4Q6AI14 798 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 FBXO25Q8TCJ0 367 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 TOP1MTQ969P6 601 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
LSM6-201ENST00000296581 C8orf48Q96LL4 319 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 SLC9A7Q96T83 725 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 ASIC3Q9UHC3 531 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 ZNF148Q9UQR1 794 aa16.17■□□□□ 0.18
LSM6-201ENST00000296581 H3BQF6 201 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 ITIH2P19823 946 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 PBX3P40426 434 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 SLC5A3P53794 718 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 PLTPP55058 493 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 RTP2Q5QGT7 225 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 FAM131BQ86XD5 332 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 PQLC3Q8N755 202 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 CCDC89Q8N998 374 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 PCDH19Q8TAB3 1148 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 RNF217Q8TC41 542 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 CCHCR1Q8TD31 782 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 SNF8Q96H20 258 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 SGSM3Q96HU1 749 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 B3GALT6Q96L58 329 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 TRIM62Q9BVG3 475 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 OXCT2Q9BYC2 517 aaPredicted RBP16.16■□□□□ 0.18
LSM6-201ENST00000296581 DHX35Q9H5Z1 703 aaKnown RBP16.16■□□□□ 0.18
LSM6-201ENST00000296581 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
LSM6-201ENST00000296581 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms