RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 DEFB106AQ8N104 65 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 FAXDC2Q96IV6 333 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 PLEKHA5Q9HAU0 1116 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 MIOSQ9NXC5 875 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 KIAA1257Q9ULG3 409 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 AP4E1Q9UPM8 1137 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 SMIM35A0A1B0GVV1 85 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 C1QAP02745 245 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 CTGFP29279 349 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 MSH2P43246 934 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 NCALDP61601 193 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 IL9RQ01113 521 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 MAP2K5Q13163 448 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 TFDP2Q14188 446 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 MTFR1Q15390 333 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 KYAT1Q16773 422 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 PAN2Q504Q3 1202 aaKnown RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 BOLA3Q53S33 107 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 OTUD1Q5VV17 481 aaPredicted RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 CDHR3Q6ZTQ4 885 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ANKRD52Q8NB46 1076 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 GTF3C2Q8WUA4 911 aaPredicted RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 DHRS4Q9BTZ2 278 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 C11orf84Q9BUA3 381 aaPredicted RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 IL1RAPL1Q9NZN1 696 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 UBQLN1Q9UMX0 589 aaKnown RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 C2orf71A6NGG8 1288 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 I6L893 689 aaPredicted RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 DPYSL4O14531 572 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 SUN1O94901 812 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 VAV1P15498 845 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 GMPRP36959 345 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 PTK7Q13308 1070 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 PLEKHG4Q58EX7 1191 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 DCAF6Q58WW2 860 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 PPP1R21Q6ZMI0 780 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ZNF534Q76KX8 674 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 GPRIN1Q7Z2K8 1008 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 NT5DC4Q86YG4 428 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 CTAGE3PQ8IX95 158 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ADGRF2Q8IZF7 708 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 LRRC52Q8N7C0 313 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 C3orf58Q8NDZ4 430 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 APPL2Q8NEU8 664 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 CSPG4P5Q96PW8 444 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 KCNK16Q96T55 309 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ACTR5Q9H9F9 607 aaPredicted RBP12.23□□□□□ -0.45
RHO-201ENST00000296271 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
RHO-201ENST00000296271 SLC15A5A6NIM6 579 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 NRP1O14786 923 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 PRPF4O43172 522 aaKnown RBP eCLIP12.22□□□□□ -0.45
RHO-201ENST00000296271 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
RHO-201ENST00000296271 HUNKP57058 714 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 NME3Q13232 169 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 SPARCL1Q14515 664 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 HHATQ5VTY9 493 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 RIBC1Q8N443 379 aaPredicted RBP12.22□□□□□ -0.45
RHO-201ENST00000296271 DTLQ9NZJ0 730 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 SLC24A2Q9UI40 661 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 ARL2BPQ9Y2Y0 163 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 TTLL3Q9Y4R7 772 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 SNX10Q9Y5X0 201 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 FAM72CH0Y354 149 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 PYGBP11216 843 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 MLH1P40692 756 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 MAP3K7CLP57077 242 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
RHO-201ENST00000296271 GALNTL6Q49A17 601 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 FAM47CQ5HY64 1035 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 FAM72AQ5TYM5 149 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 ARHGAP17Q68EM7 881 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 NCBP2-AS2Q69YL0 99 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 FAM72DQ6L9T8 149 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 SLC26A9Q7LBE3 791 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 OTOAQ7RTW8 1153 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 FAM72BQ86X60 149 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 MAP7D3Q8IWC1 876 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 CRYBG2Q8N1P7 616 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 C2orf69Q8N8R5 385 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 ZNF75CPQ92670 426 aaPredicted RBP12.22□□□□□ -0.45
RHO-201ENST00000296271 SGSM3Q96HU1 749 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
RHO-201ENST00000296271 NUP205Q92621 2012 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 PGK1P00558 417 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 TAF6P49848 677 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 SULT1E1P49888 294 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms