RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 HDAC4P56524 1084 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 HDAC7Q8WUI4 952 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 COPS5Q92905 334 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 BRD8Q9H0E9 1235 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 SLC24A2Q9UI40 661 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 DRG1Q9Y295 367 aaKnown RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 C3P01024 1663 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 CAMTA1Q9Y6Y1 1673 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 SLIT3O75094 1523 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 CBX4O00257 560 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 CCR1P32246 355 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 SOAT1P35610 550 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 BEX3Q00994 111 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 FSCN1Q16658 493 aaKnown RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 USP50Q70EL3 339 aaPredicted RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 NAT9Q9BTE0 207 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 XPNPEP3Q9NQH7 507 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 ATP11BQ9Y2G3 1177 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 FAM32AQ9Y421 112 aaKnown RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 ADRB2P07550 413 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 TM4SF1P30408 202 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 RHOAP61586 193 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 MFSD7Q6UXD7 560 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 VSIG10LQ86VR7 867 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 SPATA16Q9BXB7 569 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 UBIAD1Q9Y5Z9 338 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 CNTFP26441 200 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 NEUROG2Q9H2A3 272 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 PCDHB5Q9Y5E4 795 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 SNCAIPQ9Y6H5 919 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 BGNP21810 368 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 PPIL2Q13356 520 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 TMEM132BQ14DG7 1078 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 NFE2Q16621 373 aaPredicted RBP17.75■□□□□ 0.43
CDCP1-201ENST00000296129 C3orf20Q8ND61 904 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 SOCS4Q8WXH5 440 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 TMEM134Q9H6X4 195 aa17.75■□□□□ 0.43
CDCP1-201ENST00000296129 DNALI1O14645 258 aaPredicted RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 AMPD1P23109 780 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 GLRA2P23416 452 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 MIIPQ5JXC2 388 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 ZSWIM2Q8NEG5 633 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 KAT5Q92993 513 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 KANSL3Q9P2N6 904 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 HAO1Q9UJM8 370 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 DNAJC16Q9Y2G8 782 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 NCAM2O15394 837 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 ZC3H12BQ5HYM0 836 aaKnown RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 DAB2IPQ5VWQ8 1189 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TUBGCP3Q96CW5 907 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 UBXN6Q9BZV1 441 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 AVENQ9NQS1 362 aaPredicted RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TBC1D13Q9NVG8 400 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 DOLKQ9UPQ8 538 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 NAALADL1Q9UQQ1 740 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TRPV2Q9Y5S1 764 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 CRTAMO95727 393 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 YWHAZP63104 245 aaKnown RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 GRAMD4Q6IC98 578 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 PGLYRP2Q96PD5 576 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TBCBQ99426 244 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 SYNDIG1Q9H7V2 258 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 RNF19AQ9NV58 838 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 FAM95CA0A1B0GW59 222 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 FAM153BP0C7A2 387 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 SLC6A3Q01959 620 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 DMC1Q14565 340 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 FAM153CQ494X1 144 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 LRRC23Q53EV4 343 aaPredicted RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TAF2Q6P1X5 1199 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TFAP2DQ7Z6R9 452 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 NT5DC4Q86YG4 428 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 CCDC126Q96EE4 140 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TMEM161AQ9NX61 479 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 TAS2R14Q9NYV8 317 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 FAM153AQ9UHL3 310 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 ITM2BQ9Y287 266 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 CAPRIN2Q6IMN6 1127 aaKnown RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 PTAR1Q7Z6K3 402 aaPredicted RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 DEFB106AQ8N104 65 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 RBM22Q9NW64 420 aaKnown RBP eCLIP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 PIH1D1Q9NWS0 290 aaKnown RBP17.74■□□□□ 0.43
CDCP1-201ENST00000296129 SHOC2Q9UQ13 582 aa17.74■□□□□ 0.43
CDCP1-201ENST00000296129 UBR1Q8IWV7 1749 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 TBC1D4O60343 1298 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 ATP6V1E1P36543 226 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 ELK3P41970 407 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 MPP3Q13368 585 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 FUT11Q495W5 492 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 DNAJC19Q96DA6 116 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 E5RJQ4 531 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 TBX4P57082 545 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 GALNTL6Q49A17 601 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 C11orf96Q7Z7L8 435 aa17.73■□□□□ 0.43
CDCP1-201ENST00000296129 PATL1Q86TB9 770 aaKnown RBP17.73■□□□□ 0.43
CDCP1-201ENST00000296129 GLP2RO95838 553 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms