RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 AMIGO2Q86SJ2 522 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 OR5B17Q8NGF7 314 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 FBXL18Q96ME1 805 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 SMYD2Q9NRG4 433 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 ARHGEF38Q9NXL2 777 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 PPME1Q9Y570 386 aa10.63□□□□□ -0.71
LMX1A-201ENST00000294816 SF3B1O75533 1304 aaKnown RBP eCLIP10.63□□□□□ -0.71
LMX1A-201ENST00000294816 TTLL13PA6NNM8 815 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 H3BSA7 217 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 NOP56O00567 594 aaKnown RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 STRNO43815 780 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 EXTL3O43909 919 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 PEX1O43933 1283 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 CRTAMO95727 393 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 C4BPAP04003 597 aaKnown RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 ITGAXP20702 1163 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 MAGEA10P43363 369 aaPredicted RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 HDAC4P56524 1084 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 PSMC1P62191 440 aaKnown RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 PDK1Q15118 436 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 BSPRYQ5W0U4 402 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 FRMD7Q6ZUT3 714 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 PHTF2Q8N3S3 785 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 CMTM5Q96DZ9 223 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 SLC17A6Q9P2U8 582 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 SEPT9Q9UHD8 586 aaPredicted RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 PIK3R2O00459 728 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 LRCH4O75427 683 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 IL1BP01584 269 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 CDH6P55285 790 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 XIAPP98170 497 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 ORC1Q13415 861 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 CDO1Q16878 200 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 N4BP2L1Q5TBK1 243 aaPredicted RBP10.62□□□□□ -0.71
LMX1A-201ENST00000294816 TATDN1Q6P1N9 297 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 FBXW8Q8N3Y1 598 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 GSDMBQ8TAX9 411 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 SIKE1Q9BRV8 207 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 LRRIQ4A6NIV6 560 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 TBC1D12O60347 775 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 DNAJA2O60884 412 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 SPAG6O75602 509 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 SERPINB5P36952 375 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 GMPRP36959 345 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 NUDT2P50583 147 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 SH3D19Q5HYK7 790 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 WDR78Q5VTH9 848 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 TTLL6Q8N841 843 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 BTBD9Q96Q07 612 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 KCNK16Q96T55 309 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 ANLNQ9NQW6 1124 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 DMTF1Q9Y222 760 aa10.62□□□□□ -0.71
LMX1A-201ENST00000294816 TCP10L2B9ZVM9 353 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TNFAIP8O95379 198 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TCN1P20061 433 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 GARTP22102 1010 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TBXAS1P24557 533 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 MAGEA8P43361 318 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 PKNOX1P55347 436 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 MTERF2Q49AM1 385 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ACTRT2Q8TDY3 377 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 USP13Q92995 863 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ZNF778Q96MU6 729 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TCHPQ9BT92 498 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 MRPS26Q9BYN8 205 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 HERC5Q9UII4 1024 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ARHGAP26Q9UNA1 814 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ZNF510Q9Y2H8 683 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ZNF541Q9H0D2 1346 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 SRCAPQ6ZRS2 3230 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 GOLGA8QA0A0J9YX86 632 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 GOLGA8OA6NCC3 632 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 C3orf70A6NLC5 250 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TTC36A6NLP5 189 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 GOLGA8NF8WBI6 632 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 NEMP1O14524 444 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TRMUO75648 421 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ZBED1O96006 694 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 FAM58BPP0C7Q3 252 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 PSMD6Q15008 389 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 DUS1LQ6P1R4 473 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 C4orf19Q8IY42 314 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 TFB1MQ8WVM0 346 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 RNPEPQ9H4A4 650 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 NRDE2Q9H7Z3 1164 aa10.61□□□□□ -0.71
LMX1A-201ENST00000294816 PIH1D1Q9NWS0 290 aaKnown RBP10.61□□□□□ -0.71
LMX1A-201ENST00000294816 ITGA11Q9UKX5 1188 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms