RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 MAMLD1Q13495 774 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 SH3PXD2AQ5TCZ1 1133 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 PLPP4Q5VZY2 271 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 ZDHHC24Q6UX98 284 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 SCN4BQ8IWT1 228 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 TTC39CQ8N584 583 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 OR2W6PQ8NHA6 318 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 MCEEQ96PE7 176 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 TRIM51Q9BSJ1 452 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 ZBP1Q9H171 429 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 PABPC3Q9H361 631 aaKnown RBP11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 RABEP2Q9H5N1 569 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 CTTNBP2NLQ9P2B4 639 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 MTRRQ9UBK8 725 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 HESX1Q9UBX0 185 aa11.99□□□□□ -0.49
CHRNB3-201ENST00000289957 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 VGLL3A8MV65 326 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 TEX28O15482 410 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 LSM8O95777 96 aaKnown RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 CYP1A2P05177 515 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 CNPP09543 421 aaKnown RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 GTF2A1P52655 376 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 SEC24CP53992 1094 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 GPC5P78333 572 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 KCTD19Q17RG1 926 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 SPPL3Q8TCT6 385 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 POF1BQ8WVV4 589 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 SEPT5Q99719 369 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 TCF25Q9BQ70 676 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 SYNCQ9H7C4 482 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 METTL5Q9NRN9 209 aaKnown RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 KIAA1257Q9ULG3 409 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 NOVA2Q9UNW9 492 aaKnown RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 LILRB3O75022 631 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 RFC1P35251 1148 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 GRIK1P39086 918 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 PITX1P78337 314 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 ADCY2Q08462 1091 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 TNFAIP8L3Q5GJ75 292 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 ERMARDQ5T6L9 678 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 TRIM72Q6ZMU5 477 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 ANKS3Q6ZW76 656 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 CACNA2D3Q8IZS8 1091 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 GDPD5Q8WTR4 605 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 RAPGEF5Q92565 580 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 CD101Q93033 1021 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 DPH5Q9H2P9 285 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 GRHL1Q9NZI5 618 aa11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.98□□□□□ -0.49
CHRNB3-201ENST00000289957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 GOLGA6L7A0A1B0GV03 622 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 PER2O15055 1255 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 AGTP01019 485 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 USP17L7P0C7H9 530 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 ATF6P18850 670 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 DRD4P21917 467 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MMP13P45452 471 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 PMS2P54278 862 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MAGOHP61326 146 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 OR6B2Q6IFH4 312 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 SLC8B1Q6J4K2 584 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 OLFML1Q6UWY5 402 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 FAM43BQ6ZT52 329 aaPredicted RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 ZNF564Q8TBZ8 553 aaPredicted RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 IPO4Q8TEX9 1081 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 GIPC2Q8TF65 315 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 ARNTL2Q8WYA1 636 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 ALG3Q92685 438 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 SLCO2A1Q92959 643 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MAGOHBQ96A72 148 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 C18orf8Q96DM3 657 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 SMARCD1Q96GM5 515 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 XPO6Q96QU8 1125 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 HERC2P3Q9BVR0 1158 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 STMN4Q9H169 189 aaPredicted RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 FAM124BQ9H5Z6 455 aaPredicted RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MTRF1LQ9UGC7 380 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 CEP83Q9Y592 693 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 PLXNA3P51805 1871 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 NRG2O14511 850 aaPredicted RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 XPO1O14980 1071 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 RASSF9O75901 435 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 URODP06132 367 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 FAM163BP0C2L3 166 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MARCKSL1P49006 195 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 TKTL1P51854 596 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 IFFO1Q0D2I5 559 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 GPR17Q13304 367 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MESDQ14696 234 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 MGAT5BQ3V5L5 792 aa11.97□□□□□ -0.49
CHRNB3-201ENST00000289957 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms