RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 BNIP1Q12981 228 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 MAMLD1Q13495 774 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TAF5Q15542 800 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 DENND2CQ68D51 928 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TRIM72Q6ZMU5 477 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 PEX26Q7Z412 305 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 SLFN11Q7Z7L1 901 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 PHF13Q86YI8 300 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TPCN2Q8NHX9 752 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 CLEC4CQ8WTT0 213 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 SLC35F5Q8WV83 523 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 NDRG1Q92597 394 aaKnown RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 PRCCQ92733 491 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 KLHL29Q96CT2 875 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 HTATIP2Q9BUP3 242 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 YIPF3Q9GZM5 350 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 LHX5Q9H2C1 402 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 KRT82Q9NSB4 513 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ZFATQ9P243 1243 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 INTUQ9ULD6 942 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 USP15Q9Y4E8 981 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 RGS16O15492 202 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 GRAP2O75791 330 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 CYP1A2P05177 515 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 KRT16P08779 473 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 NEFHP12036 1026 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 BDNFP23560 247 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ABL2P42684 1182 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 MSH2P43246 934 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ARPP19P56211 112 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 MAP3K7CLP57077 242 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ATP11AP98196 1134 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 CLEC20AQ6ZU45 233 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 DAAM2Q86T65 1068 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 METTL23Q86XA0 190 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TTC9BQ8N6N2 239 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ANKRD52Q8NB46 1076 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 AUTS2Q8WXX7 1259 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 MYLPFQ96A32 169 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 IGSF21Q96ID5 467 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ACBD6Q9BR61 282 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TRIM51Q9BSJ1 452 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 MED10Q9BTT4 135 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 COLEC11Q9BWP8 271 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 FAM124BQ9H5Z6 455 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 SYNCQ9H7C4 482 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 ZDHHC18Q9NUE0 388 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 HESX1Q9UBX0 185 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 TTC7AQ9ULT0 858 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 NCANO14594 1321 aa10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 SF3B1O75533 1304 aaKnown RBP eCLIP10.11□□□□□ -0.79
LRTOMT-201ENST00000289488 VCANP13611 3396 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 PLXNA4Q9HCM2 1894 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 ADAM12O43184 909 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 OAZ2O95190 189 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 LINC00271P0C7V0 271 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 PCSK1P29120 753 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 NDUFV1P49821 464 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 SF3A3Q12874 501 aaKnown RBP eCLIP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 PPP2R5EQ16537 467 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 ARHGAP17Q68EM7 881 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 GPRIN1Q7Z2K8 1008 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 SYCE1Q8N0S2 351 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 ZNF564Q8TBZ8 553 aaPredicted RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 PKMYT1Q99640 499 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 OSBPL1AQ9BXW6 950 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 MIS12Q9H081 205 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 STMN4Q9H169 189 aaPredicted RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 CDH9Q9ULB4 789 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 MTUS1Q9ULD2 1270 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 SLC4A7Q9Y6M7 1214 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 A0A0A6YYK5 440 aaPredicted RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 A8MUI8 341 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 EFCAB14O75071 495 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 AP1G2O75843 785 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 SUN1O94901 812 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 ARHGEF15O94989 841 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 LCP1P13796 627 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 TYMPP19971 482 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 FGFR3P22607 806 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 CYP2F1P24903 491 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 DNAJB2P25686 324 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 C1QBPQ07021 282 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 MESDQ14696 234 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 TAF11Q15544 211 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 CTXN3Q4LDR2 81 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 DUPD1Q68J44 220 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 FAM171BQ6P995 826 aa10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 PSRC1Q6PGN9 363 aaPredicted RBP10.1□□□□□ -0.79
LRTOMT-201ENST00000289488 SLC30A9Q6PML9 568 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms