RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 FAM149B1Q96BN6 582 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 CAPN11Q9UMQ6 739 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 ITIH6Q6UXX5 1313 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 SART1O43290 800 aaKnown RBP20.78■□□□□ 0.92
TIMP4-201ENST00000287814 STC2O76061 302 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 TPM3P06753 285 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 HMBSP08397 361 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 UNGP13051 313 aaPredicted RBP20.78■□□□□ 0.92
TIMP4-201ENST00000287814 RUNX3Q13761 415 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 PDGFRLQ15198 375 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 ASIC2Q16515 512 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 ADGRG2Q8IZP9 1017 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 CSGALNACT1Q8TDX6 532 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 CHFRQ96EP1 664 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 C1QTNF1Q9BXJ1 281 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 SYNCQ9H7C4 482 aa20.78■□□□□ 0.92
TIMP4-201ENST00000287814 SLC12A8A0AV02 714 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 KLKB1P03952 638 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 SKILP12757 684 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 NCAM1P13591 858 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 IFNAR2P48551 515 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 STARD6P59095 220 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 YWHAZP63104 245 aaKnown RBP20.77■□□□□ 0.92
TIMP4-201ENST00000287814 TMEM31Q5JXX7 168 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 MSANTD2Q6P1R3 559 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 TPRG1Q6ZUI0 275 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 HTR3DQ70Z44 454 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 BMP8AQ7Z5Y6 402 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 FMNL3Q8IVF7 1028 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 VSTM4Q8IW00 320 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 BBS7Q8IWZ6 715 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 IPO4Q8TEX9 1081 aaKnown RBP20.77■□□□□ 0.92
TIMP4-201ENST00000287814 C18orf8Q96DM3 657 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 HAUS4Q9H6D7 363 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 OLA1Q9NTK5 396 aaKnown RBP20.77■□□□□ 0.92
TIMP4-201ENST00000287814 SH3BP1Q9Y3L3 701 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 PIAS3Q9Y6X2 628 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 TICRRQ7Z2Z1 1910 aa20.77■□□□□ 0.92
TIMP4-201ENST00000287814 MSI1O43347 362 aaKnown RBP20.77■□□□□ 0.91
TIMP4-201ENST00000287814 GRAP2O75791 330 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 CCDC172P0C7W6 258 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 CASP14P31944 242 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 PRKCIP41743 596 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 COG7P83436 770 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 ZBED6P86452 979 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 SLC6A3Q01959 620 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 CLEC16AQ2KHT3 1053 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 ITPRIPL2Q3MIP1 535 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 SPECC1LQ69YQ0 1117 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 TRIM72Q6ZMU5 477 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 ZNF571Q7Z3V5 609 aaPredicted RBP20.77■□□□□ 0.91
TIMP4-201ENST00000287814 XYLT1Q86Y38 959 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 KIAA1958Q8N8K9 716 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 GOLGA1Q92805 767 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 LRFN3Q9BTN0 628 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 DDX23Q9BUQ8 820 aaKnown RBP20.77■□□□□ 0.91
TIMP4-201ENST00000287814 ECT2Q9H8V3 914 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 TBC1D17Q9HA65 648 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 STRIP2Q9ULQ0 834 aa20.77■□□□□ 0.91
TIMP4-201ENST00000287814 MMP8P22894 467 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 KPNA1P52294 538 aaPredicted RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 PITX1P78337 314 aaPredicted RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 PRKCQQ04759 706 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 CWF19L1Q69YN2 538 aaKnown RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 TXNDC11Q6PKC3 985 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 Q6ZNB5 142 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 MMS22LQ6ZRQ5 1243 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 BEND5Q7L4P6 421 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 FLCNQ8NFG4 579 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 DQX1Q8TE96 717 aaKnown RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 FOXQ1Q9C009 403 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 POPDC2Q9HBU9 364 aa20.76■□□□□ 0.91
TIMP4-201ENST00000287814 SEPT11Q9NVA2 429 aaKnown RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 LUC7L2Q9Y383 392 aaKnown RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 MTF2Q9Y483 593 aaPredicted RBP20.76■□□□□ 0.91
TIMP4-201ENST00000287814 PRR33A8MZF0 331 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 SNX16P57768 344 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 PTP4A2Q12974 167 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 EFHC1Q5JVL4 640 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 HGSNATQ68CP4 663 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 RHBDF2Q6PJF5 856 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 SLC26A9Q7LBE3 791 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 PHLDB2Q86SQ0 1253 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 DEFB106AQ8N104 65 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 ADAM32Q8TC27 787 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 ATP2A3Q93084 1043 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 SLC2A13Q96QE2 648 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 TRIM5Q9C035 493 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 MFSD1Q9H3U5 465 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 ASNSD1Q9NWL6 643 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 TAS2R14Q9NYV8 317 aa20.75■□□□□ 0.91
TIMP4-201ENST00000287814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.75■□□□□ 0.91
TIMP4-201ENST00000287814 SPECC1L-ADORA2AF8WAN1 911 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 PI15O43692 258 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 GLI1P08151 1106 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 CTHP32929 405 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 CENPCQ03188 943 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 GOLGA8FQ08AF8 430 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 GOLGA8DPQ0D2H9 430 aa20.74■□□□□ 0.91
TIMP4-201ENST00000287814 KLHL30Q0D2K2 578 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms