RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 TMEM176AQ96HP8 235 aa16.06■□□□□ 0.16
PDE6D-201ENST00000287600 HNRNPABQ99729 332 aaKnown RBP16.06■□□□□ 0.16
PDE6D-201ENST00000287600 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
PDE6D-201ENST00000287600 FAM124BQ9H5Z6 455 aaPredicted RBP16.06■□□□□ 0.16
PDE6D-201ENST00000287600 DMAP1Q9NPF5 467 aaPredicted RBP16.06■□□□□ 0.16
PDE6D-201ENST00000287600 SAMSN1Q9NSI8 373 aaKnown RBP16.06■□□□□ 0.16
PDE6D-201ENST00000287600 ANGPTL2Q9UKU9 493 aa16.06■□□□□ 0.16
PDE6D-201ENST00000287600 CACNA1BQ00975 2339 aa16.06■□□□□ 0.16
PDE6D-201ENST00000287600 THADAQ6YHU6 1953 aa16.06■□□□□ 0.16
PDE6D-201ENST00000287600 TPRP12270 2363 aaKnown RBP16.05■□□□□ 0.16
PDE6D-201ENST00000287600 ANTXRLA6NF34 631 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 ALDH1A2O94788 518 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 KAT7O95251 611 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 APODP05090 189 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 FAM200BP0CF97 657 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 EIF2DP41214 584 aaKnown RBP16.05■□□□□ 0.16
PDE6D-201ENST00000287600 SLC6A11P48066 632 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 MAP3K7CLP57077 242 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 MRPS21P82921 87 aaKnown RBP16.05■□□□□ 0.16
PDE6D-201ENST00000287600 CRY1Q16526 586 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 N4BP2L1Q5TBK1 243 aaPredicted RBP16.05■□□□□ 0.16
PDE6D-201ENST00000287600 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
PDE6D-201ENST00000287600 RRAGAQ7L523 313 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 CYP2U1Q7Z449 544 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 RASSF3Q86WH2 238 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 C12orf40Q86WS4 652 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 ADGRG2Q8IZP9 1017 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 ALLCQ8N6M5 410 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 OVCA2Q8WZ82 227 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 KAT5Q92993 513 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 PNKPQ96T60 521 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 SMOQ99835 787 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 TBC1D14Q9P2M4 693 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 SH3BP1Q9Y3L3 701 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
PDE6D-201ENST00000287600 ACACBO00763 2458 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 KCNJ18B7U540 433 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 TM4SF5O14894 197 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 COCHO43405 550 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 BEST1O76090 585 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 KLF8O95600 359 aaPredicted RBP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 BCKDHBP21953 392 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 PMLP29590 882 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 SLC5A3P53794 718 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 KCNJ12Q14500 433 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 ARHGEF19Q8IW93 802 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 SFTPA1Q8IWL2 248 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 TXNDC5Q8NBS9 432 aaKnown RBP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 ZMIZ2Q8NF64 920 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 SPACA7Q96KW9 195 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 TUBGCP2Q9BSJ2 902 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 LSM14BQ9BX40 385 aaKnown RBP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 NACA2Q9H009 215 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 ARHGEF4Q9NR80 690 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDE6D-201ENST00000287600 MYOFQ9NZM1 2061 aa16.04■□□□□ 0.16
PDE6D-201ENST00000287600 E2F8A0AVK6 867 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 LNP1A1A4G5 178 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 KCNK5O95279 499 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 CD19P15391 556 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 SLC9A1P19634 815 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 ACO1P21399 889 aaKnown RBP16.03■□□□□ 0.16
PDE6D-201ENST00000287600 DHPSP49366 369 aaPredicted RBP16.03■□□□□ 0.16
PDE6D-201ENST00000287600 GCNT1Q02742 428 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 TYRO3Q06418 890 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 HSF5Q4G112 596 aaPredicted RBP16.03■□□□□ 0.16
PDE6D-201ENST00000287600 VWA3BQ502W6 1294 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 EOGTQ5NDL2 527 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 PSAPL1Q6NUJ1 521 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 RHBDF2Q6PJF5 856 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 TMEM270Q6UE05 265 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 TMEM92Q6UXU6 159 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 GBP6Q6ZN66 633 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 CLEC20AQ6ZU45 233 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 UBR7Q8N806 425 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 SCAMP5Q8TAC9 235 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 JAKMIP2Q96AA8 810 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 NDST4Q9H3R1 872 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 CSNK1G1Q9HCP0 422 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 POLMQ9NP87 494 aaPredicted RBP16.03■□□□□ 0.16
PDE6D-201ENST00000287600 GMIPQ9P107 970 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 PCDHB4Q9Y5E5 795 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 MYH10P35580 1976 aa16.03■□□□□ 0.16
PDE6D-201ENST00000287600 C4orf47A7E2U8 309 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 SGK1O00141 431 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.16
PDE6D-201ENST00000287600 TNFRSF10BO14763 440 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 KHNYNO15037 678 aaKnown RBP16.02■□□□□ 0.16
PDE6D-201ENST00000287600 EEF1GP26641 437 aaKnown RBP16.02■□□□□ 0.16
PDE6D-201ENST00000287600 GRIA2P42262 883 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 GAD2Q05329 585 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 MESP2Q0VG99 397 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 EXOC3L4Q17RC7 722 aa16.02■□□□□ 0.16
PDE6D-201ENST00000287600 KLHL40Q2TBA0 621 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms