RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 DNAL1Q4LDG9 190 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 ERAP2Q6P179 960 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 CCDC149Q6ZUS6 474 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 SETD3Q86TU7 594 aaPredicted RBP19.1■□□□□ 0.65
PCDH1-201ENST00000287008 HTATIP2Q9BUP3 242 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 SMIM22K7EJ46 135 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 FAM110CQ1W6H9 321 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 DSG4Q86SJ6 1040 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 UNC93AQ86WB7 457 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 CMTM5Q96DZ9 223 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 GID8Q9NWU2 228 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 CHI3L2Q15782 390 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 ZIM3Q96PE6 472 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 ILKAPQ9H0C8 392 aaPredicted RBP19.09■□□□□ 0.65
PCDH1-201ENST00000287008 UBP1Q9NZI7 540 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 SF3B1O75533 1304 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCDH1-201ENST00000287008 GLP2RO95838 553 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 CDH2P19022 906 aaPredicted RBP19.09■□□□□ 0.65
PCDH1-201ENST00000287008 ARHGEF19Q8IW93 802 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 REXO1L1PQ8IX06 675 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 ZNF557Q8N988 423 aaPredicted RBP19.09■□□□□ 0.65
PCDH1-201ENST00000287008 COLGALT1Q8NBJ5 622 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 ULBP1Q9BZM6 244 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 RBAK-RBAKDNI3L0D1 243 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 GRK3P35626 688 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 C11orf63Q6NUN7 778 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 HOMEZQ8IX15 550 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 PURBQ96QR8 312 aaKnown RBP19.09■□□□□ 0.65
PCDH1-201ENST00000287008 MARCH2Q9P0N8 246 aa19.09■□□□□ 0.65
PCDH1-201ENST00000287008 MAFO75444 373 aaPredicted RBP19.08■□□□□ 0.65
PCDH1-201ENST00000287008 SOAT1P35610 550 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 MPP3Q13368 585 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 TP53BP2Q13625 1128 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 GJC2Q5T442 439 aaPredicted RBP19.08■□□□□ 0.65
PCDH1-201ENST00000287008 TATDN1Q6P1N9 297 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 PALB2Q86YC2 1186 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 LGI2Q8N0V4 545 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 TRIM66O15016 1216 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 SLC6A3Q01959 620 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 RFX8Q6ZV50 586 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 ARID3BQ8IVW6 561 aaPredicted RBP19.08■□□□□ 0.65
PCDH1-201ENST00000287008 LPCAT1Q8NF37 534 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 ADAM32Q8TC27 787 aa19.08■□□□□ 0.65
PCDH1-201ENST00000287008 IARS2Q9NSE4 1012 aaKnown RBP19.08■□□□□ 0.65
PCDH1-201ENST00000287008 C6orf203Q9P0P8 240 aaPredicted RBP19.08■□□□□ 0.65
PCDH1-201ENST00000287008 MTO1Q9Y2Z2 717 aaKnown RBP19.08■□□□□ 0.65
PCDH1-201ENST00000287008 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 AIM2O14862 343 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 SGCGQ13326 291 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 MANSC1Q9H8J5 431 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 COPS7BQ9H9Q2 264 aaPredicted RBP19.08■□□□□ 0.64
PCDH1-201ENST00000287008 WHRNQ9P202 907 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 ACOT9Q9Y305 439 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 HES2Q9Y543 173 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 TRPC5OSA6NMA1 111 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 SPATA31C2B4DYI2 1134 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 SERPINB8P50452 374 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 WSCD1Q658N2 575 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 CSGALNACT1Q8TDX6 532 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 FAM136AQ96C01 138 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 CCT8L2Q96SF2 557 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 DUSP9Q99956 384 aaKnown RBP19.08■□□□□ 0.64
PCDH1-201ENST00000287008 POPDC2Q9HBU9 364 aa19.08■□□□□ 0.64
PCDH1-201ENST00000287008 PTPN1P18031 435 aaKnown RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 SKOR1P84550 965 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 NOMO2Q5JPE7 1267 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ACTRT1Q8TDG2 376 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 CYP3A7-CYP3A51PA0A087WV96 503 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ADCY6O43306 1168 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 RARGP13631 454 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ITGB5P18084 799 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 CYP3A7P24462 503 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 PBLDP30039 288 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ATP5C1P36542 298 aaKnown RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 FIBCD1Q8N539 461 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ICA1LQ8NDH6 482 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 HAS1Q92839 578 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 TUBGCP3Q96CW5 907 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 EPN3Q9H201 632 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 SCHIP1Q9P0W5 487 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 CDV3Q9UKY7 258 aaKnown RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 PDZK1P1A8MUH7 402 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 PLA2G6O60733 806 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ATP5BP06576 529 aaKnown RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 SARSP49591 514 aaKnown RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 ZNF135P52742 658 aaPredicted RBP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 PHKG1Q16816 387 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCDH1-201ENST00000287008 IL31RAQ8NI17 732 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 PPP1R13LQ8WUF5 828 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 FAM111AQ96PZ2 611 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 RBBP8Q99708 897 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 GGT7Q9UJ14 662 aa19.07■□□□□ 0.64
PCDH1-201ENST00000287008 IFRD1O00458 451 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 SLC9A3R1O14745 358 aaPredicted RBP19.06■□□□□ 0.64
PCDH1-201ENST00000287008 FAM107AO95990 144 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 PLCL1Q15111 1095 aa19.06■□□□□ 0.64
PCDH1-201ENST00000287008 FBXO25Q8TCJ0 367 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms