RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CYS1Q717R9 158 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 KIAA0319LQ8IZA0 1049 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 MCUQ8NE86 351 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 WNK4Q96J92 1243 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 FAM167AQ96KS9 214 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 PLEKHG4BQ96PX9 1271 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 PANX3Q96QZ0 392 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 MTMR12Q9C0I1 747 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 EPB41L1Q9H4G0 881 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 PTPRHQ9HD43 1115 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 PAK5Q9P286 719 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 HACL1Q9UJ83 578 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 TTLL3Q9Y4R7 772 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 OPHN1O60890 802 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 LGR5O75473 907 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 IL18RAPO95256 599 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 BAG2O95816 211 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ASLP04424 464 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 FAM200BP0CF97 657 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 MYL2P10916 166 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ELK3P41970 407 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ROR1Q01973 937 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 SP2Q02086 613 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ITGA9Q13797 1035 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 STXBP2Q15833 593 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ZNF699Q32M78 642 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 AAGABQ6PD74 315 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 TSHZ1Q6ZSZ6 1077 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 JOSD2Q8TAC2 188 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 HAUS1Q96CS2 278 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 C1orf21Q9H246 121 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
SKA1-201ENST00000285116 IGKV6-21A0A0C4DH24 114 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 GOLGA8SH3BPF8 625 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 H3BRJ5 948 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 GOLGA8MH3BSY2 632 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TMCC1O94876 653 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 INHBAP08476 426 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 SSTR3P32745 418 aaPredicted RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 MAGEA3P43357 314 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ASPHQ12797 758 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 MED21Q13503 144 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 GRM2Q14416 872 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 MXD4Q14582 209 aaPredicted RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 BBS9Q3SYG4 887 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 CYP4A22Q5TCH4 519 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TIFABQ6ZNK6 161 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 CYP4V2Q6ZWL3 525 aaPredicted RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 TTC7BQ86TV6 843 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 IGDCC3Q8IVU1 814 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ULK2Q8IYT8 1036 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 RBM15BQ8NDT2 890 aaKnown RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 OR6Y1Q8NGX8 325 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 PIP4K2CQ8TBX8 421 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 AFG1LQ8WV93 481 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 LENG1Q96BZ8 264 aaPredicted RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 PCYT2Q99447 389 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TTC1Q99614 292 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 NMUR2Q9GZQ4 415 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 EBF3Q9H4W6 596 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 STN1Q9H668 368 aaKnown RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 ASNSD1Q9NWL6 643 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 PLA2G4CQ9UP65 541 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 PLLPQ9Y342 182 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 IKBKGQ9Y6K9 419 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 EYSQ5T1H1 3165 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 SPECC1L-ADORA2AF8WAN1 911 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 DPYSL4O14531 572 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 BUD23O43709 281 aaKnown RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 RBP3P10745 1247 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TGM2P21980 687 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 RPS12P25398 132 aaKnown RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 TNFSF9P41273 254 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 CPA2P48052 419 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ZNF143P52747 638 aaPredicted RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 USP46P62068 366 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 PSMC1P62191 440 aaKnown RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 XIAPP98170 497 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TRPC3Q13507 836 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TMEM132BQ14DG7 1078 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 TEX44Q53QW1 395 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 LGSNQ5TDP6 509 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 C1orf146Q5VVC0 180 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 FAM160B1Q5W0V3 765 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ATG16L1Q676U5 607 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 PDSS2Q86YH6 399 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ZNF280CQ8ND82 737 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 CHST13Q8NET6 341 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ACSF2Q96CM8 615 aaPredicted RBP10.75□□□□□ -0.69
SKA1-201ENST00000285116 CYP3A43Q9HB55 503 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 USP29Q9HBJ7 922 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 ARMCX1Q9P291 453 aa10.75□□□□□ -0.69
SKA1-201ENST00000285116 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 KBTBD13C9JR72 458 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SNNO75324 88 aaPredicted RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 KRT37O76014 449 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 TNNC2P02585 160 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 HMGCRP04035 888 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms