RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 ZNF268Q14587 947 aaPredicted RBP14.27□□□□□ -0.12
LPCAT1-201ENST00000283415 CHI3L2Q15782 390 aa14.27□□□□□ -0.12
LPCAT1-201ENST00000283415 RABGAP1LQ5R372 815 aa14.27□□□□□ -0.12
LPCAT1-201ENST00000283415 C16orf46Q6P387 395 aa14.27□□□□□ -0.12
LPCAT1-201ENST00000283415 WDR83Q9BRX9 315 aaKnown RBP14.27□□□□□ -0.12
LPCAT1-201ENST00000283415 FETUBQ9UGM5 382 aa14.27□□□□□ -0.12
LPCAT1-201ENST00000283415 CITO14578 2027 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 GPR25O00155 361 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 PRPF4O43172 522 aaKnown RBP eCLIP14.27□□□□□ -0.139e-7■■■■□ 22.1
LPCAT1-201ENST00000283415 ASS1P00966 412 aaKnown RBP14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 C6orf222P0C671 652 aaPredicted RBP14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 AMPD1P23109 780 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 RPL22P35268 128 aaKnown RBP14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 GEMIN4P57678 1058 aaKnown RBP14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 KLC1Q07866 573 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 FAAP100Q0VG06 881 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 KBTBD12Q3ZCT8 623 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 TLDC1Q6P9B6 456 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 WDR49Q8IV35 697 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 PPIL6Q8IXY8 311 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 ALLCQ8N6M5 410 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 ARFGAP1Q8N6T3 406 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 ZNF75CPQ92670 426 aaPredicted RBP14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 MECRQ9BV79 373 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 ZCWPW1Q9H0M4 648 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 SLC17A7Q9P2U7 560 aa14.27□□□□□ -0.13
LPCAT1-201ENST00000283415 SBF1O95248 1867 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SOWAHBA6NEL2 793 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SPECC1L-ADORA2AF8WAN1 911 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 MSCO60682 206 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SERPINB4P48594 390 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 CCL15Q16663 113 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 NKD2Q969F2 451 aaPredicted RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SGF29Q96ES7 293 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 GPRC5DQ9NZD1 345 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 MYO18AQ92614 2054 aaKnown RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 COL4A4P53420 1690 aaPredicted RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 DGKIO75912 1065 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 LSM8O95777 96 aaKnown RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 TYK2P29597 1187 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 THEMIS2Q5TEJ8 643 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 AGGF1Q8N302 714 aaeCLIP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 RIBC1Q8N443 379 aaPredicted RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 BEST2Q8NFU1 509 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 EDEM1Q92611 657 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 ACO2Q99798 780 aaKnown RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 DONSONQ9NYP3 566 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 CPA4Q9UI42 421 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 TAC1P20366 129 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 SULT1E1P49888 294 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 MCL1Q07820 350 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 CRYMQ14894 314 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 KPNB1Q14974 876 aaKnown RBP14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 RAB6CQ53S08 254 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 ANKRD13AQ8IZ07 590 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 RAB6CQ9H0N0 254 aa14.26□□□□□ -0.13
LPCAT1-201ENST00000283415 ASMTLO95671 621 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 TPH1P17752 444 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 TCN1P20061 433 aaPredicted RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 BEX3Q00994 111 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 RNASEH2BQ5TBB1 312 aaKnown RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 CCNYL1Q8N7R7 359 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 DNERQ8NFT8 737 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 SLC35B2Q8TB61 432 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 DNAJB3Q8WWF6 145 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 CDKL2Q92772 493 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 C18orf25Q96B23 403 aaPredicted RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 TMEM120AQ9BXJ8 343 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 XYLT2Q9H1B5 865 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 PRMT7Q9NVM4 692 aaPredicted RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 GRID1Q9ULK0 1009 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 EFR3BQ9Y2G0 817 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 PPME1Q9Y570 386 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 KRT36O76013 467 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 NR1H3Q13133 447 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 MTFR1Q15390 333 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 TMCO4Q5TGY1 634 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 C9orf131Q5VYM1 1079 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 BZW1Q7L1Q6 419 aaKnown RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 PRPF39Q86UA1 669 aaKnown RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 SLC7A14Q8TBB6 771 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 ARHGEF3Q9NR81 526 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 FAM237BA0A1B0GVD1 139 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 FZD9O00144 591 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 ACKR2O00590 384 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 UNC5CO95185 931 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 SLC25A11Q02978 314 aaKnown RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 RNF43Q68DV7 783 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 AP5M1Q9H0R1 490 aa14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 SSU72Q9NP77 194 aaKnown RBP14.25□□□□□ -0.13
LPCAT1-201ENST00000283415 E7ESA3 106 aa14.24□□□□□ -0.13
LPCAT1-201ENST00000283415 CCDC22O60826 627 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms