RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 CCDC47Q96A33 483 aaKnown RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 PRDM16Q9HAZ2 1276 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 NXF1Q9UBU9 619 aaKnown RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 PCOLCE2Q9UKZ9 415 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
MRPS28-201ENST00000276585 PCDHA5Q9Y5H7 936 aa13.05□□□□□ -0.32
MRPS28-201ENST00000276585 IKBKBO14920 756 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 CBFA2T3O75081 653 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 PHACTR2O75167 634 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 HLA-DRAP01903 254 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 HLA-EP13747 358 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 PTPN1P18031 435 aaKnown RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 EIF2S3P41091 472 aaKnown RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 ASPAP45381 313 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 VAMP7P51809 220 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 ZNF33AQ06730 810 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 ENPEPQ07075 957 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 TAF12Q16514 161 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 EDRF1Q3B7T1 1238 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 PLEKHG6Q3KR16 790 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 ZNF667Q5HYK9 610 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 TXNDC8Q6A555 127 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 PCSK4Q6UW60 755 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 PAQR9Q6ZVX9 377 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 SCN4BQ8IWT1 228 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 FAM186BQ8IYM0 893 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 B3GALNT2Q8NCR0 500 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 OR6B3Q8NGW1 331 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 EEF2KMTQ96G04 330 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 SPATA17Q96L03 361 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 TTLL2Q9BWV7 592 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 SNX25Q9H3E2 840 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
MRPS28-201ENST00000276585 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 MAGEC2Q9UBF1 373 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 MAGED2Q9UNF1 606 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-201ENST00000276585 B8ZZF3 427 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 F8VP50 259 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 ERVH48-1M5A8F1 160 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 CLDN5O00501 218 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 SLC28A2O43868 658 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 KIF20AO95235 890 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 ATXN1LP0C7T5 689 aaKnown RBP13.03□□□□□ -0.32
MRPS28-201ENST00000276585 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
MRPS28-201ENST00000276585 GCLMP48507 274 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 IFNAR2P48551 515 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 MAPRE1Q15691 268 aaKnown RBP13.03□□□□□ -0.32
MRPS28-201ENST00000276585 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-201ENST00000276585 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
MRPS28-201ENST00000276585 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 GSDMAQ96QA5 445 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 DUS2Q9NX74 493 aaKnown RBP13.03□□□□□ -0.32
MRPS28-201ENST00000276585 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 ZMYM5Q9UJ78 669 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 COL12A1Q99715 3063 aa13.03□□□□□ -0.32
MRPS28-201ENST00000276585 MYO9AB2RTY4 2548 aa13.02□□□□□ -0.32
MRPS28-201ENST00000276585 C2orf78A6NCI8 922 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 TRIM49BA6NDI0 452 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 ANTXRLA6NF34 631 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 A8MXQ7 604 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 K7EQS6 105 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 PLK4O00444 970 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 BMP6P22004 513 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 PSMC2P35998 433 aaKnown RBP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 PIK3CAP42336 1068 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 CXADRP78310 365 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 NOP14P78316 857 aaKnown RBP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 SEMG2Q02383 582 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 USP4Q13107 963 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 NR1H3Q13133 447 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 ORC1Q13415 861 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 ADAM9Q13443 819 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 ZNF268Q14587 947 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 SLC36A4Q6YBV0 504 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 ALLCQ8N6M5 410 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 TXNDC5Q8NBS9 432 aaKnown RBP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 BAP1Q92560 729 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
MRPS28-201ENST00000276585 SEMA4DQ92854 862 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 NXPE2Q96DL1 559 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 C8orf48Q96LL4 319 aa13.02□□□□□ -0.33
MRPS28-201ENST00000276585 CEP295NLQ96MC4 621 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms