RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

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Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ARHGAP26Q9UNA1 814 aa13.27□□□□□ -0.28
HERC6-202ENST00000273960 TNFAIP8O95379 198 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 AMHP03971 560 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 THRAP10827 490 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 OXCT1P55809 520 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 PSMC1P62191 440 aaKnown RBP13.27□□□□□ -0.29
HERC6-202ENST00000273960 FLOT2Q14254 428 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 SPDYAQ5MJ70 313 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 SCARA3Q6AZY7 606 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 NXNQ6DKJ4 435 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 OTOP1Q7RTM1 612 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 EMC1Q8N766 993 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 TSPAN14Q8NG11 270 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 EXD1Q8NHP7 514 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 MZB1Q8WU39 189 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 EME1Q96AY2 570 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 FAF2Q96CS3 445 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 NACC1Q96RE7 527 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 RSL24D1Q9UHA3 163 aaKnown RBP13.27□□□□□ -0.29
HERC6-202ENST00000273960 CIDEBQ9UHD4 219 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 TRIM17Q9Y577 477 aa13.27□□□□□ -0.29
HERC6-202ENST00000273960 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 ABCG1P45844 678 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 GRM2Q14416 872 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 TAF5Q15542 800 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 FASTKD1Q53R41 847 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 BRDTQ58F21 947 aaPredicted RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 RARS2Q5T160 578 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 PDPK2PQ6A1A2 396 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 SAMD7Q7Z3H4 446 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 ATP2A3Q93084 1043 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 ALKBH8Q96BT7 664 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 THAP11Q96EK4 314 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 FAM20AQ96MK3 541 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 SPATA7Q9P0W8 599 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 A8MU76 341 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 WDR64B1ANS9 1081 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 OCM2P0CE71 109 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 OCMP0CE72 109 aaPredicted RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 ITGAXP20702 1163 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 PAX3P23760 479 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 CRADDP78560 199 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 LDLRAP1Q5SW96 308 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 TRMT10BQ6PF06 316 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 DARS2Q6PI48 645 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 TMA16Q96EY4 203 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 RAB6BQ9NRW1 208 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 SHOC2Q9UQ13 582 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 TBC1D30Q9Y2I9 924 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 TMEM247A6NEH6 219 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 H7C0C1 242 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 APRTP07741 180 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 PTPN1P18031 435 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 GNA15P30679 374 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 ATP5OP48047 213 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 ACOT2P49753 483 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 MRPS5P82675 430 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 BTG3Q14201 252 aaPredicted RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 CARTPTQ16568 116 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 POTEHQ6S545 545 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 NUP93Q8N1F7 819 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 BHLHE22Q8NFJ8 381 aaPredicted RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 DIS3LQ8TF46 1054 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 TFB1MQ8WVM0 346 aaKnown RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 C17orf75Q9HAS0 396 aa13.26□□□□□ -0.29
HERC6-202ENST00000273960 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
HERC6-202ENST00000273960 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 A0A0B4J269 797 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 FBP2O00757 339 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 TGDSO95455 350 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 SERPINA6P08185 405 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 BAG6P46379 1132 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 SLC18A1P54219 525 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 CSE1LP55060 971 aaKnown RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 ORC1Q13415 861 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 PKP2Q99959 881 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 CCDC28BQ9BUN5 200 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 PLLPQ9Y342 182 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 NR2E3Q9Y5X4 410 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 CEPT1Q9Y6K0 416 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 H3BNX3 289 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 KRT37O76014 449 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 GSTT2P0CG29 244 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 GSTT2BP0CG30 244 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 RFX1P22670 979 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 TSPY1Q01534 308 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 OGDHQ02218 1023 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 DMPKQ09013 629 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 ANO4Q32M45 955 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 SLC15A3Q8IY34 581 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms