RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 CYP4F12Q9HCS2 524 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 INPP4BO15327 924 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 CYP21A2P08686 494 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 RNASE12Q5GAN4 147 aaKnown RBP16.19■□□□□ 0.18
UBR3-201ENST00000272793 C9orf72Q96LT7 481 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 ZNF350Q9GZX5 532 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 SHOC2Q9UQ13 582 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 TPRKBQ9Y3C4 175 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 STOMP27105 288 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 SLC30A5Q8TAD4 765 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 RAPSNQ13702 412 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 MYBPC3Q14896 1274 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
UBR3-201ENST00000272793 RIBC2Q9H4K1 309 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 FBXO28Q9NVF7 368 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 RBAKQ9NYW8 714 aaPredicted RBP16.19■□□□□ 0.18
UBR3-201ENST00000272793 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 POTEMA6NI47 508 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 VPS26AO75436 327 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 IFNA6P05013 189 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 UQCRBP14927 111 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 FGFR3P22607 806 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 MAPK1P28482 360 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 GNA13Q14344 377 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 KBTBD12Q3ZCT8 623 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 HAO1Q9UJM8 370 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 GGA2Q9UJY4 613 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 OGDHLQ9ULD0 1010 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 ASXL3Q9C0F0 2248 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 PRKAB2O43741 272 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 LARGE1O95461 756 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 CHRNDQ07001 517 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 BRINP3Q76B58 766 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 RTKN2Q8IZC4 609 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 PCDH19Q8TAB3 1148 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 PRRG4Q9BZD6 226 aa16.19■□□□□ 0.18
UBR3-201ENST00000272793 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 GHRP10912 638 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 PTPN9P43378 593 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 CRKP46108 304 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 CLVS1Q8IUQ0 354 aaPredicted RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 OR5T3Q8NGG3 340 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 HAT1O14929 419 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 RGS21Q2M5E4 152 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 C5orf22Q49AR2 442 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 TCHHL1Q5QJ38 904 aaPredicted RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 BLOC1S5Q8TDH9 187 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 COPS4Q9BT78 406 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBR3-201ENST00000272793 WEE2P0C1S8 567 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 PTX3P26022 381 aaPredicted RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 ASMTP46597 345 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 CWF19L1Q69YN2 538 aaKnown RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 CARD8Q9Y2G2 431 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 CCT8L1PA6NM43 557 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 AXIN1O15169 862 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 FCGR1AP12314 374 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 FASP25445 335 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 POC5Q8NA72 575 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 ITGB1BP2Q9UKP3 347 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 GRIP1Q9Y3R0 1128 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 TMEM120BA0PK00 339 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 GRAP2O75791 330 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 APBA3O96018 575 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 PDGFRBP09619 1106 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 IREB2P48200 963 aaKnown RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 DHX40Q8IX18 779 aaKnown RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 IRX2Q9BZI1 471 aaPredicted RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 ZSWIM5Q9P217 1185 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 C9IYK1 514 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 GJA9P57773 515 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 KNOP1Q1ED39 458 aaKnown RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 RESP18Q5W5W9 173 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 SUGP1Q8IWZ8 645 aaKnown RBP16.18■□□□□ 0.18
UBR3-201ENST00000272793 RCOR2Q8IZ40 523 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 CLIP3Q96DZ5 547 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 NLNQ9BYT8 704 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 DPY30Q9C005 99 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 KCNIP3Q9Y2W7 256 aa16.18■□□□□ 0.18
UBR3-201ENST00000272793 EEF2KO00418 725 aaKnown RBP16.17■□□□□ 0.18
UBR3-201ENST00000272793 TEX33O43247 280 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 MYL9P24844 172 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 OVGP1Q12889 678 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 SMTNL2Q2TAL5 461 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 DCAF6Q58WW2 860 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 ISLR2Q6UXK2 745 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 RBM15Q96T37 977 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■■□□ 16.9
UBR3-201ENST00000272793 ZNF341Q9BYN7 854 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 SYCP2Q9BX26 1530 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 A0A1W2PQ72 361 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 OR14I1A6ND48 311 aa16.17■□□□□ 0.18
UBR3-201ENST00000272793 TTLL13PA6NNM8 815 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms