RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 WDR78Q5VTH9 848 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 RXFP2Q8WXD0 754 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 ETNK2Q9NVF9 386 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 ZNF180Q9UJW8 692 aa28.49■■■□□ 2.15
CBX4-201ENST00000269397 KRT38O76015 456 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 GJB1P08034 283 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 PDGFRAP16234 1089 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 EPHB1P54762 984 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 RASIP1Q5U651 963 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 MTHFD1LQ6UB35 978 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 ADGRF2Q8IZF7 708 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 STKLD1Q8NE28 680 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 HIPK4Q8NE63 616 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 RNF157Q96PX1 679 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 ELOVL4Q9GZR5 314 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 SNNO75324 88 aaPredicted RBP28.48■■■□□ 2.15
CBX4-201ENST00000269397 TNNC2P02585 160 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 PRKCBP05771 671 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 CCNFP41002 786 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 GSTA3Q16772 222 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 CFAP157Q5JU67 520 aa28.48■■■□□ 2.15
CBX4-201ENST00000269397 CCDC124Q96CT7 223 aaKnown RBP28.48■■■□□ 2.15
CBX4-201ENST00000269397 NR1H4Q96RI1 486 aaPredicted RBP28.48■■■□□ 2.15
CBX4-201ENST00000269397 XAB2Q9HCS7 855 aaKnown RBP28.48■■■□□ 2.15
CBX4-201ENST00000269397 B4GALT5O43286 388 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 CPOXP36551 454 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 TMEM132AQ24JP5 1023 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 EFCAB3Q8N7B9 438 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 ZNF778Q96MU6 729 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 NIFKQ9BYG3 293 aaKnown RBP28.47■■■□□ 2.15
CBX4-201ENST00000269397 PDE5AO76074 875 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 SERPINA6P08185 405 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 CXCL8P10145 99 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 RPL10AP62906 217 aaKnown RBP28.47■■■□□ 2.15
CBX4-201ENST00000269397 PTPN11Q06124 597 aaPredicted RBP28.47■■■□□ 2.15
CBX4-201ENST00000269397 ZNF667Q5HYK9 610 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 LPCAT4Q643R3 524 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 DENND5BQ6ZUT9 1274 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 ZFAND2BQ8WV99 257 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 MCRS1Q96EZ8 462 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 MYOZ2Q9NPC6 264 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 NR2E3Q9Y5X4 410 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 SIP14410 1827 aa28.47■■■□□ 2.15
CBX4-201ENST00000269397 PRPSAP2O60256 369 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 IL4RP24394 825 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 CRABP2P29373 138 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 GSTT1P30711 240 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 ZNF143P52747 638 aaPredicted RBP28.46■■■□□ 2.15
CBX4-201ENST00000269397 TFDP2Q14188 446 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 ANKRD36BP1Q96IX9 119 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 KLC2Q9H0B6 622 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 SDR42E2A6NKP2 422 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 ENDOD1O94919 500 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 KCNA4P22459 653 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 BCAR1P56945 870 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 FASTKD1Q53R41 847 aaKnown RBP28.46■■■□□ 2.15
CBX4-201ENST00000269397 OR6B2Q6IFH4 312 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 RNF111Q6ZNA4 994 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 RSPH3Q86UC2 560 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 CYP4F11Q9HBI6 524 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 SIX4Q9UIU6 781 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 SOX13Q9UN79 622 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 DNAJC16Q9Y2G8 782 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 BUD23O43709 281 aaKnown RBP28.46■■■□□ 2.15
CBX4-201ENST00000269397 METTL18O95568 372 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 GPD1P21695 349 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 BACE1P56817 501 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 PEX6Q13608 980 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 HIC1Q14526 733 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 CA9Q16790 459 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 PQLC3Q8N755 202 aa28.46■■■□□ 2.15
CBX4-201ENST00000269397 NGRNQ9NPE2 291 aaKnown RBP28.46■■■□□ 2.15
CBX4-201ENST00000269397 PIH1D1Q9NWS0 290 aaKnown RBP28.46■■■□□ 2.15
CBX4-201ENST00000269397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.45■■■□□ 2.14
CBX4-201ENST00000269397 LAMTOR4Q0VGL1 99 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 GRM1Q13255 1194 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 TARBP2Q15633 366 aaKnown RBP28.45■■■□□ 2.14
CBX4-201ENST00000269397 EEF1DP3Q658K8 133 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 FLAD1Q8NFF5 587 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 SLC26A7Q8TE54 656 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 DEPDC1BQ8WUY9 529 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 HEXIM2Q96MH2 286 aaKnown RBP28.45■■■□□ 2.14
CBX4-201ENST00000269397 TRDMT1O14717 391 aaKnown RBP28.45■■■□□ 2.14
CBX4-201ENST00000269397 RTN3O95197 1032 aaPredicted RBP28.45■■■□□ 2.14
CBX4-201ENST00000269397 GPD2P43304 727 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 PPP6R3Q5H9R7 873 aaPredicted RBP28.45■■■□□ 2.14
CBX4-201ENST00000269397 FAM47CQ5HY64 1035 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 ACAD9Q9H845 621 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 AFG3L2Q9Y4W6 797 aa28.45■■■□□ 2.14
CBX4-201ENST00000269397 PCNTO95613 3336 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 NFICP08651 508 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 ETS2P15036 469 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 ADORA2AP29274 412 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 HSPA1LP34931 641 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 CRHR1P34998 444 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 GMPRP36959 345 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 CRADDP78560 199 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 STXBP2Q15833 593 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 RASSF3Q86WH2 238 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 MTMR14Q8NCE2 650 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms