RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DSEQ9UL01 958 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 FZD10Q9ULW2 581 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 SMIM23A6NLE4 172 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 EOMESO95936 686 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 AGTP01019 485 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SLCO1A2P46721 670 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 NRLP54845 237 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SYPL2Q5VXT5 272 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 ANKRD22Q5VYY1 191 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SLC24A5Q71RS6 500 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 B4GALNT4Q76KP1 1039 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 METTL23Q86XA0 190 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 FAM131BQ86XD5 332 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 PSTKQ8IV42 348 aaKnown RBP17.29■□□□□ 0.36
CCDC40-201ENST00000269318 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 HASPINQ8TF76 798 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 RTP4Q96DX8 246 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SAYSD1Q9NPB0 183 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 CNGB3Q9NQW8 809 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 USP3Q9Y6I4 520 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.29■□□□□ 0.36
CCDC40-201ENST00000269318 F8W810 466 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 ARVCFO00192 962 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 B4GALT3O60512 393 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 ABHD2P08910 425 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 IFI35P80217 286 aaPredicted RBP17.29■□□□□ 0.36
CCDC40-201ENST00000269318 LONRF1Q17RB8 773 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 CLLU1OSQ5K130 101 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 BHLHA9Q7RTU4 235 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 OR10T2Q8NGX3 314 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SUSD3Q96L08 255 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 SERPINB12Q96P63 405 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 CSPG4P5Q96PW8 444 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 RHOBTB2Q9BYZ6 727 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 PHACTR1Q9C0D0 580 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 STAP1Q9ULZ2 295 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 PHF24Q9UPV7 400 aa17.29■□□□□ 0.36
CCDC40-201ENST00000269318 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 E7ENQ6 273 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 H7C0C1 242 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 ALOX15BO15296 676 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 GRK4P32298 578 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
CCDC40-201ENST00000269318 ATP5OP48047 213 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 VEGFBP49765 207 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 DSC1Q08554 894 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 FASTKD3Q14CZ7 662 aaKnown RBP17.28■□□□□ 0.36
CCDC40-201ENST00000269318 ZSCAN26Q16670 478 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 ZNF296Q8WUU4 475 aaPredicted RBP17.28■□□□□ 0.36
CCDC40-201ENST00000269318 TMLHEQ9NVH6 421 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 CWC15Q9P013 229 aaKnown RBP17.28■□□□□ 0.36
CCDC40-201ENST00000269318 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 HEY1Q9Y5J3 304 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 BCLAF3A2AJT9 711 aaKnown RBP17.28■□□□□ 0.36
CCDC40-201ENST00000269318 FKTNO75072 461 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 LSP1P33241 339 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 GAD2Q05329 585 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 GLB1LQ6UWU2 654 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 PYROXD2Q8N2H3 581 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 TTC25Q96NG3 672 aa17.28■□□□□ 0.36
CCDC40-201ENST00000269318 RCOR3Q9P2K3 495 aaPredicted RBP17.28■□□□□ 0.36
CCDC40-201ENST00000269318 COL4A4P53420 1690 aaPredicted RBP17.27■□□□□ 0.36
CCDC40-201ENST00000269318 TCRBV7S3A2A0A539 114 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 CFAP69A5D8W1 941 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 M0QYT0 321 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 SMAPO00193 183 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 DDHD2O94830 711 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 TMEM63AO94886 807 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 ZFXP17010 805 aaPredicted RBP17.27■□□□□ 0.36
CCDC40-201ENST00000269318 TYMPP19971 482 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 YY1P25490 414 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 MMP13P45452 471 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 PRMT2P55345 433 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 SLC10A2Q12908 348 aaPredicted RBP17.27■□□□□ 0.36
CCDC40-201ENST00000269318 OVOS1Q6IE37 1185 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 CENPUQ71F23 418 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 LRRTM3Q86VH5 581 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 ZNF280BQ86YH2 543 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 TMEM209Q96SK2 561 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 STMN4Q9H169 189 aaPredicted RBP17.27■□□□□ 0.36
CCDC40-201ENST00000269318 PIGVQ9NUD9 493 aa17.27■□□□□ 0.36
CCDC40-201ENST00000269318 ZBED1O96006 694 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 USP17L7P0C7H9 530 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 GOT1P17174 413 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 RBL1P28749 1068 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 NR2C2P49116 596 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 CDK7P50613 346 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 GBE1Q04446 702 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 HIF1AQ16665 826 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 NCBP2-AS2Q69YL0 99 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 CNOT10Q9H9A5 744 aaKnown RBP17.26■□□□□ 0.35
CCDC40-201ENST00000269318 E7ESA3 106 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 GOLGA8MH3BSY2 632 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 KCNN4O15554 427 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 BDNFP23560 247 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 DEUP1Q05D60 604 aa17.26■□□□□ 0.35
CCDC40-201ENST00000269318 PDIA2Q13087 525 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms