RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 RPL10AP62906 217 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 GUCY2DQ02846 1103 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 DEUP1Q05D60 604 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 DPYSL3Q14195 570 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 KAZNQ674X7 775 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 MON1AQ86VX9 555 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 FIBCD1Q8N539 461 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 TTC9BQ8N6N2 239 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 EIF1ADQ8N9N8 165 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 PHOSPHO2Q8TCD6 241 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 CLP1Q92989 425 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 CRISPLD1Q9H336 500 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 PCDH18Q9HCL0 1135 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 EPB41L5Q9HCM4 733 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ARFGAP3Q9NP61 516 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ABCC13Q9NSE7 274 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 AFF4Q9UHB7 1163 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 ABLIM3O94929 683 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 RTN3O95197 1032 aaPredicted RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 LINC00271P0C7V0 271 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 IL4RP24394 825 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 L1CAMP32004 1257 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 GPR15P49685 360 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 DUSP4Q13115 394 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 KRT81Q14533 505 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ZC3H12AQ5D1E8 599 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 TPGS2Q68CL5 300 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 SCD5Q86SK9 330 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 JAMLQ86YT9 394 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 CCDC105Q8IYK2 499 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ARHGAP18Q8N392 663 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 CCDC185Q8N715 623 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 TTC13Q8NBP0 860 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ATL2Q8NHH9 583 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 SLC7A14Q8TBB6 771 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 NTAN1Q96AB6 310 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 FAF2Q96CS3 445 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 RAD9AQ99638 391 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 ZNF670Q9BS34 389 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 HTATIP2Q9BUP3 242 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 CALN1Q9BXU9 219 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 RAB17Q9H0T7 212 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 WDR6Q9NNW5 1121 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 PIGVQ9NUD9 493 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 TMEM51Q9NW97 253 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 RASAL2Q9UJF2 1139 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 FZD10Q9ULW2 581 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 AP4E1Q9UPM8 1137 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 SLC27A5Q9Y2P5 690 aa14.69□□□□□ -0.06
SS18-201ENST00000269137 UTP11Q9Y3A2 253 aaKnown RBP14.69□□□□□ -0.06
SS18-201ENST00000269137 KIAA1671Q9BY89 1806 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 PLXNA3P51805 1871 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 CST8O60676 142 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 TUFMP49411 452 aaKnown RBP14.68□□□□□ -0.06
SS18-201ENST00000269137 DRG2P55039 364 aaKnown RBP14.68□□□□□ -0.06
SS18-201ENST00000269137 CUL1Q13616 776 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 TFDP2Q14188 446 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 CA9Q16790 459 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 MGAT5BQ3V5L5 792 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 MAP9Q49MG5 647 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 SDHAF4Q5VUM1 108 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 TMCO3Q6UWJ1 677 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 DENND5BQ6ZUT9 1274 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 SYDE1Q6ZW31 735 aaPredicted RBP14.68□□□□□ -0.06
SS18-201ENST00000269137 FAM131BQ86XD5 332 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 HERC6Q8IVU3 1022 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 ZNF461Q8TAF7 563 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 SP7Q8TDD2 431 aaPredicted RBP14.68□□□□□ -0.06
SS18-201ENST00000269137 GRK7Q8WTQ7 553 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 ATG4AQ8WYN0 398 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 EDEM1Q92611 657 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 RNF157Q96PX1 679 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 HINFPQ9BQA5 517 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 ERP44Q9BS26 406 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 ZBED2Q9BTP6 218 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 MAK16Q9BXY0 300 aaKnown RBP14.68□□□□□ -0.06
SS18-201ENST00000269137 GPATCH2LQ9NWQ4 482 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 MTMR10Q9NXD2 777 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
SS18-201ENST00000269137 GREB1Q4ZG55 1949 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 ZNF638Q14966 1978 aaKnown RBP14.67□□□□□ -0.06
SS18-201ENST00000269137 ZSCAN5CA6NGD5 496 aaPredicted RBP14.67□□□□□ -0.06
SS18-201ENST00000269137 C2CD2LO14523 706 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 LIASO43766 372 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 ECEL1O95672 775 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 IGLV3-25P01717 112 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 URODP06132 367 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 RPL17P18621 184 aaKnown RBP14.67□□□□□ -0.06
SS18-201ENST00000269137 YWHAQP27348 245 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 KCNJ1P48048 391 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 CXCR3P49682 368 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 KRT17Q04695 432 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 SCAPQ12770 1279 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 NME3Q13232 169 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 EIF4EBP2Q13542 120 aaPredicted RBP14.67□□□□□ -0.06
SS18-201ENST00000269137 BEND6Q5SZJ8 279 aaPredicted RBP14.67□□□□□ -0.06
SS18-201ENST00000269137 BTBD8Q5XKL5 378 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 DUPD1Q68J44 220 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 RFX6Q8HWS3 928 aa14.67□□□□□ -0.06
SS18-201ENST00000269137 VPS52Q8N1B4 723 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms