RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SH2D5Q6ZV89 423 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 AGBL3Q8NEM8 1001 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 CDHR1Q96JP9 859 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 CDT1Q9H211 546 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 DHX35Q9H5Z1 703 aaKnown RBP17.43■□□□□ 0.38
SQLE-201ENST00000265896 RPF1Q9H9Y2 349 aaKnown RBP17.43■□□□□ 0.38
SQLE-201ENST00000265896 LNPEPQ9UIQ6 1025 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 PPEF2O14830 753 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 CCNG1P51959 295 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 KCNJ11Q14654 390 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 FKBP1CQ5VVH2 108 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 LPCAT4Q643R3 524 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 CYP4V2Q6ZWL3 525 aaPredicted RBP17.42■□□□□ 0.38
SQLE-201ENST00000265896 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 SULF1Q8IWU6 871 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 TP53INP2Q8IXH6 220 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 OXCT2Q9BYC2 517 aaPredicted RBP17.42■□□□□ 0.38
SQLE-201ENST00000265896 UNKQ9C0B0 810 aaKnown RBP17.42■□□□□ 0.38
SQLE-201ENST00000265896 PDGFCQ9NRA1 345 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 ETNK2Q9NVF9 386 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 SLC7A8Q9UHI5 535 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 WDR27A2RRH5 827 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 IL4RP24394 825 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 GPD2P43304 727 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 CACNA2D1P54289 1103 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 SLC10A2Q12908 348 aaPredicted RBP17.42■□□□□ 0.38
SQLE-201ENST00000265896 TCHHL1Q5QJ38 904 aaPredicted RBP17.42■□□□□ 0.38
SQLE-201ENST00000265896 EFCAB12Q6NXP0 572 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 PMF1Q6P1K2 205 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 TNS4Q8IZW8 715 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 TTC13Q8NBP0 860 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 CMASQ8NFW8 434 aaPredicted RBP17.42■□□□□ 0.38
SQLE-201ENST00000265896 DEPDC1BQ8WUY9 529 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 PHACTR1Q9C0D0 580 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 POPDC2Q9HBU9 364 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 PLLPQ9Y342 182 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 HES2Q9Y543 173 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 PSAT1Q9Y617 370 aa17.42■□□□□ 0.38
SQLE-201ENST00000265896 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 TRAFD1O14545 582 aaPredicted RBP17.41■□□□□ 0.38
SQLE-201ENST00000265896 SNRPAP09012 282 aaKnown RBP17.41■□□□□ 0.38
SQLE-201ENST00000265896 NOMO1Q15155 1222 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 TTC39BQ5VTQ0 682 aaPredicted RBP17.41■□□□□ 0.38
SQLE-201ENST00000265896 PQLC3Q8N755 202 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 AZIN2Q96A70 460 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 TMEM176AQ96HP8 235 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 CLMNQ96JQ2 1002 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 LGMNQ99538 433 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 SPATS2LQ9NUQ6 558 aaKnown RBP17.41■□□□□ 0.38
SQLE-201ENST00000265896 PNPOQ9NVS9 261 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 GOLGA8TH3BQL2 631 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 KRT37O76014 449 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 PDGFRBP09619 1106 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 STAG3L1P0CL83 205 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 NCF2P19878 526 aaPredicted RBP17.41■□□□□ 0.38
SQLE-201ENST00000265896 SAT1P21673 171 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 GPD1P21695 349 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 MCCD1P59942 119 aaPredicted RBP17.41■□□□□ 0.38
SQLE-201ENST00000265896 MAP3K10Q02779 954 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 ULK2Q8IYT8 1036 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 NIPA2Q8N8Q9 360 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 RNF157Q96PX1 679 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 DNAJC16Q9Y2G8 782 aa17.41■□□□□ 0.38
SQLE-201ENST00000265896 SLC15A5A6NIM6 579 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 ABLIM1O14639 778 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 MAP3K7O43318 606 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 MAFO75444 373 aaPredicted RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 ZBTB7AO95365 584 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 PIGRP01833 764 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 DHRS4L1P0CG22 281 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 SLC18A1P54219 525 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 TNFAIP1Q13829 316 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 CCDC14Q49A88 953 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 CFAP157Q5JU67 520 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 RAPH1Q70E73 1250 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 SCUBE1Q8IWY4 988 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 ZBED3Q96IU2 234 aaPredicted RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 SNRNP25Q9BV90 132 aaKnown RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 RNPEPQ9H4A4 650 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 RSAD1Q9HA92 442 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 CNTN3Q9P232 1028 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 PCDHGC3Q9UN70 934 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 A0A087WZ62 844 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 PDE1BQ01064 536 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 TARBP2Q15633 366 aaKnown RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 PPP1R26Q5T8A7 1209 aaPredicted RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 FAM219BQ5XKK7 198 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 MPZL3Q6UWV2 235 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 ADGRF2Q8IZF7 708 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 PPFIBP2Q8ND30 876 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 SLC26A7Q8TE54 656 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 HPDLQ96IR7 371 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 FDXACB1Q9BRP7 624 aaPredicted RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 TLE6Q9H808 572 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 ASNSD1Q9NWL6 643 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 AK5Q9Y6K8 562 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 LCP1P13796 627 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms