RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZNF76P36508 570 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 MRPS22P82650 360 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 QRICH1Q2TAL8 776 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ANKRD22Q5VYY1 191 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SLC47A2Q86VL8 602 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 PASD1Q8IV76 773 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 PQLC1Q8N2U9 271 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 RILPQ96NA2 401 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 HERC2P3Q9BVR0 1158 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 CDH19Q9H159 772 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 UBE2TQ9NPD8 197 aaPredicted RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 HERC5Q9UII4 1024 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 RGPD3A6NKT7 1758 aaPredicted RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 RGPD4Q7Z3J3 1758 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ATRNL1Q5VV63 1379 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 A0A0B4J269 797 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 CHMP2AO43633 222 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 LYPLA1O75608 230 aaPredicted RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 SULT1C4O75897 302 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 KRT10P13645 584 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 CPA3P15088 417 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ITGAXP20702 1163 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ACADVLP49748 655 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 BMXP51813 675 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SLC12A3P55017 1021 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 MLLT10P55197 1068 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 C21orf59P57076 290 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 GNA12Q03113 381 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 NSUN2Q08J23 767 aaKnown RBP eCLIP9.08□□□□□ -0.96
VAPB-201ENST00000265619 TUBB3Q13509 450 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SPIDRQ14159 915 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 CLUL1Q15846 466 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ATP13A4Q4VNC1 1196 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 EFHC2Q5JST6 749 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 GSTA5Q7RTV2 222 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 RSPH3Q86UC2 560 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TICAM1Q8IUC6 712 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TRIML2Q8N7C3 387 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ANKK1Q8NFD2 765 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 PTCD2Q8WV60 388 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 KLC2Q9H0B6 622 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 CAAP1Q9H8G2 361 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 JMJD4Q9H9V9 463 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TBC1D23Q9NUY8 699 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 PLK2Q9NYY3 685 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 NAV1Q8NEY1 1877 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 EML1O00423 815 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ZNF23P17027 643 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TCF7P36402 384 aaPredicted RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 XIAPP98170 497 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 IFITM2Q01629 132 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ZNF543Q08ER8 600 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 KLF1Q13351 362 aaPredicted RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 ANGEL2Q5VTE6 544 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 KAZNQ674X7 775 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 FRMD7Q6ZUT3 714 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SH2D5Q6ZV89 423 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 CADM3Q8N126 398 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 SLC15A4Q8N697 577 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 RNF148Q8N7C7 305 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 LMO3Q8TAP4 145 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 TFB1MQ8WVM0 346 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 HPS1Q92902 700 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 GFM2Q969S9 779 aaKnown RBP9.08□□□□□ -0.96
VAPB-201ENST00000265619 CGREF1Q99674 301 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 PKP2Q99959 881 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 APEX2Q9UBZ4 518 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 DNPEPQ9ULA0 475 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 RABL2BQ9UNT1 228 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 GPSM3Q9Y4H4 160 aa9.08□□□□□ -0.96
VAPB-201ENST00000265619 PCM1Q15154 2024 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PI4K2BG5E9Z4 385 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 GOLGA8TH3BQL2 631 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 DDX39AO00148 427 aaKnown RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 CNOT3O75175 753 aaKnown RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 GUCY1B2O75343 617 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 DDNO94850 711 aaPredicted RBP9.07□□□□□ -0.96
VAPB-201ENST00000265619 P4HA1P13674 534 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 CD58P19256 250 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 GABPAQ06546 454 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 ARL13BQ3SXY8 428 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 VWA5B1Q5TIE3 1220 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 PPP2R2DQ66LE6 453 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 USP43Q70EL4 1123 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 GPR180Q86V85 440 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 IGDCC3Q8IVU1 814 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 CHPT1Q8WUD6 406 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 VTA1Q9NP79 307 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 RNF181Q9P0P0 153 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 RIMS3Q9UJD0 308 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 ARFGEF1Q9Y6D6 1849 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 TCRBV7S3A2A0A539 114 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 SDR42E2A6NKP2 422 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 TCF4P15884 667 aa9.07□□□□□ -0.96
VAPB-201ENST00000265619 NMT1P30419 496 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms