RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CYP2F1P24903 491 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 GARSP41250 739 aaKnown RBP16.88■□□□□ 0.29
CTCF-201ENST00000264010 PSEN2P49810 448 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 AP1B1Q10567 949 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 ACCSLQ4AC99 568 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 CCDC92Q53HC0 331 aaPredicted RBP16.88■□□□□ 0.29
CTCF-201ENST00000264010 TRABD2AQ86V40 505 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 SLC38A7Q9NVC3 462 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 SMPD1P17405 629 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 OASLQ15646 514 aaKnown RBP16.88■□□□□ 0.29
CTCF-201ENST00000264010 PREPLQ4J6C6 727 aaPredicted RBP16.88■□□□□ 0.29
CTCF-201ENST00000264010 ARHGAP22Q7Z5H3 698 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 PHTF1Q9UMS5 762 aa16.88■□□□□ 0.29
CTCF-201ENST00000264010 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 ZBTB42B2RXF5 422 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 CD48P09326 243 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 IL1R2P27930 398 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 MAML3Q96JK9 1138 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 SYT17Q9BSW7 474 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 GLTPD2A6NH11 291 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 SNRPAP09012 282 aaKnown RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 C6orf222P0C671 652 aaPredicted RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 TSHRP16473 764 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 DYNC1I2Q13409 638 aaKnown RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 ATG16L1Q676U5 607 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 LRRC6Q86X45 466 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 CMASQ8NFW8 434 aaPredicted RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 HIC2Q96JB3 615 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 SUPT3HO75486 399 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 SLC25A11Q02978 314 aaKnown RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 NOMO1Q15155 1222 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 TMEM63BQ5T3F8 832 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 ANKS1BQ7Z6G8 1248 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 DNAAF3Q8N9W5 541 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 CPT1BQ92523 772 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 TUBB6Q9BUF5 446 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 SNRNP25Q9BV90 132 aaKnown RBP16.87■□□□□ 0.29
CTCF-201ENST00000264010 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
CTCF-201ENST00000264010 PSME4Q14997 1843 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 A0A0G2JND7 137 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 C2CD4BA6NLJ0 364 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 UBOX5O94941 541 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 HUNKP57058 714 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 FUKQ8N0W3 1084 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 GLIS1Q8NBF1 620 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 TTC1Q99614 292 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 RNF19AQ9NV58 838 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 ZFATQ9P243 1243 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 DCTN4Q9UJW0 460 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 CYB561D2O14569 222 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 BANF1O75531 89 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 CREB1P16220 341 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 RBL1P28749 1068 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 FASTKD3Q14CZ7 662 aaKnown RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 FAM110CQ1W6H9 321 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 LCA5Q86VQ0 697 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 RELL1Q8IUW5 271 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 ANKRD52Q8NB46 1076 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 SLC2A14Q8TDB8 520 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 CCDC134Q9H6E4 229 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 ALG13Q9NP73 1137 aaKnown RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 F5H423 210 aaPredicted RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 FAM200BP0CF97 657 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 CCDC130P13994 396 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 DARSP14868 501 aaKnown RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 ZNF252P-AS1Q0IIN9 211 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 PRAMEF19Q5SWL8 479 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 TTC39BQ5VTQ0 682 aaPredicted RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 TFB1MQ8WVM0 346 aaKnown RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
CTCF-201ENST00000264010 RILPQ96NA2 401 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 ANLNQ9NQW6 1124 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 TUBGCP4Q9UGJ1 667 aa16.86■□□□□ 0.29
CTCF-201ENST00000264010 SMIM35A0A1B0GVV1 85 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 CHADO15335 359 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 NOL3O60936 208 aaKnown RBP16.85■□□□□ 0.29
CTCF-201ENST00000264010 TAF5Q15542 800 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 SDCCAG8Q86SQ7 713 aaPredicted RBP16.85■□□□□ 0.29
CTCF-201ENST00000264010 FAM131BQ86XD5 332 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 TDRPQ86YL5 185 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 PPP1R13LQ8WUF5 828 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 HSFY1Q96LI6 401 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 ZNF317Q96PQ6 595 aaPredicted RBP16.85■□□□□ 0.29
CTCF-201ENST00000264010 ACSS3Q9H6R3 686 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 TTLL3Q9Y4R7 772 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 ARHGEF37A1IGU5 675 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 KBTBD13C9JR72 458 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
CTCF-201ENST00000264010 RGS2P41220 211 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 FKBP1BP68106 108 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms