RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ULBP1Q9BZM6 244 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 LRRC4Q9HBW1 653 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 WDR35Q9P2L0 1181 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 DEC1Q9P2X7 70 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 MMP17Q9ULZ9 603 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 EML5Q05BV3 1969 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 TBC1D3BA6NDS4 549 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
USE1-201ENST00000263897 KIR2DL1P43626 348 aaPredicted RBP16.87■□□□□ 0.29
USE1-201ENST00000263897 GCNT1Q02742 428 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 KDSRQ06136 332 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 EFEMP1Q12805 493 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 HSF5Q4G112 596 aaPredicted RBP16.87■□□□□ 0.29
USE1-201ENST00000263897 PREPLQ4J6C6 727 aaPredicted RBP16.87■□□□□ 0.29
USE1-201ENST00000263897 ARHGEF19Q8IW93 802 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 FAM160A2Q8N612 972 aaPredicted RBP16.87■□□□□ 0.29
USE1-201ENST00000263897 IL17RCQ8NAC3 791 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 NDRG1Q92597 394 aaKnown RBP16.87■□□□□ 0.29
USE1-201ENST00000263897 ZSWIM1Q9BR11 485 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 PARD6AQ9NPB6 346 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 MARK1Q9P0L2 795 aa16.87■□□□□ 0.29
USE1-201ENST00000263897 LRP3O75074 770 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 KLKB1P03952 638 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 SETSIPP0DME0 302 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 TIE1P35590 1138 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 SPEM2Q0P670 501 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 STILQ15468 1287 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 CRY1Q16526 586 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 TPGS1Q6ZTW0 290 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 NUDT18Q6ZVK8 323 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 RSRC2Q7L4I2 434 aaKnown RBP16.86■□□□□ 0.29
USE1-201ENST00000263897 BHLHA9Q7RTU4 235 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.86■□□□□ 0.29
USE1-201ENST00000263897 SCML4Q8N228 414 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 ALLCQ8N6M5 410 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 MLKLQ8NB16 471 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 TSTD1Q8NFU3 115 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 KCNV2Q8TDN2 545 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 SLC35F5Q8WV83 523 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 RMDN1Q96DB5 314 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 KREMEN1Q96MU8 473 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 XPO6Q96QU8 1125 aaKnown RBP16.86■□□□□ 0.29
USE1-201ENST00000263897 BBS2Q9BXC9 721 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 DCLK3Q9C098 648 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 INTS2Q9H0H0 1204 aaKnown RBP16.86■□□□□ 0.29
USE1-201ENST00000263897 CLSTN2Q9H4D0 955 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 MARCH2Q9P0N8 246 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 RASAL2Q9UJF2 1139 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 CNTN6Q9UQ52 1028 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 ZNF510Q9Y2H8 683 aa16.86■□□□□ 0.29
USE1-201ENST00000263897 NEDD8-MDP1E9PL57 170 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 TRIM24O15164 1050 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 CACNG3O60359 315 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 GABBR2O75899 941 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 KLF8O95600 359 aaPredicted RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 TYRP14679 529 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 DGKEP52429 567 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 ADIGQ0VDE8 80 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 TMEM92Q6UXU6 159 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 KBTBD6Q86V97 674 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 IRF2BP1Q8IU81 584 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 TXNDC5Q8NBS9 432 aaKnown RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 RBBP8NLQ8NC74 664 aaPredicted RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 LOXL4Q96JB6 756 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 ZC3H10Q96K80 434 aaKnown RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 IPO9Q96P70 1041 aaKnown RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 UBE2TQ9NPD8 197 aaPredicted RBP16.85■□□□□ 0.29
USE1-201ENST00000263897 STRIP2Q9ULQ0 834 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 USP18Q9UMW8 372 aa16.85■□□□□ 0.29
USE1-201ENST00000263897 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.85■□□□□ 0.29
USE1-201ENST00000263897 ABCA7Q8IZY2 2146 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 SLC12A8A0AV02 714 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 E7ENQ6 273 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 SGK1O00141 431 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 CALCAP01258 141 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 HMBSP08397 361 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 HNRNPLP14866 589 aaKnown RBP eCLIP16.84■□□□□ 0.29
USE1-201ENST00000263897 BRD2P25440 801 aaKnown RBP16.84■□□□□ 0.29
USE1-201ENST00000263897 CHKAP35790 457 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 ZNF132P52740 706 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 EOGTQ5NDL2 527 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 BSPRYQ5W0U4 402 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 GRAMD4Q6IC98 578 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 PMF1Q6P1K2 205 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 CLEC17AQ6ZS10 378 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 TERB1Q8NA31 727 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 CNOT6LQ96LI5 555 aaKnown RBP16.84■□□□□ 0.29
USE1-201ENST00000263897 CNGB3Q9NQW8 809 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 OLA1Q9NTK5 396 aaKnown RBP16.84■□□□□ 0.29
USE1-201ENST00000263897 DNAJC17Q9NVM6 304 aaKnown RBP16.84■□□□□ 0.29
USE1-201ENST00000263897 FBXO10Q9UK96 956 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
USE1-201ENST00000263897 PRR5-ARHGAP8B1AHC4 643 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 CISD3P0C7P0 127 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms