RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 KRT3P12035 628 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 ZXDBP98169 803 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 MAMLD1Q13495 774 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 PPP1R15BQ5SWA1 713 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 MSANTD2Q6P1R3 559 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 ADHFE1Q8IWW8 467 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 PLCD3Q8N3E9 789 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 ZNF653Q96CK0 615 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 EIF3CQ99613 913 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 NACA2Q9H009 215 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 METTL5Q9NRN9 209 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 TDP1Q9NUW8 608 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 PARVAQ9NVD7 372 aa17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 CNOT8Q9UFF9 292 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-201ENST00000262570 LOC730098B7Z3J9 87 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 MDM4O15151 490 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 ATMINO43313 823 aaPredicted RBP17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 DAB1O75553 588 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 GJB6O95452 261 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 PRAMEF12O95522 483 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 MBL2P11226 248 aaPredicted RBP17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 NOS2P35228 1153 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 FLT3P36888 993 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 MATKP42679 507 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 EFEMP1Q12805 493 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 DCAF6Q58WW2 860 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 C10orf76Q5T2E6 689 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 DNAJC24Q6P3W2 148 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 ZDHHC14Q8IZN3 488 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 CCDC112Q8NEF3 446 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 USP13Q92995 863 aaPredicted RBP17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 ZFRQ96KR1 1074 aaKnown RBP17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 SELENOOQ9BVL4 669 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 PACSIN1Q9BY11 444 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 SMG9Q9H0W8 520 aaKnown RBP17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 ARHGAP26Q9UNA1 814 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 CCL26Q9Y258 94 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 VCANP13611 3396 aa17.37■□□□□ 0.37
CHCHD3-201ENST00000262570 H2AFZP0C0S5 128 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 FCARP24071 287 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 RFC1P35251 1148 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 GPC5P78333 572 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 ZP2Q05996 745 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 SPA17Q15506 151 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 TRNP1Q6NT89 227 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 PARM1Q6UWI2 310 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 H2AFVQ71UI9 128 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 MIB1Q86YT6 1006 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 JOSD2Q8TAC2 188 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 DQX1Q8TE96 717 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 FGF14Q92915 247 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 DDX23Q9BUQ8 820 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 KLF16Q9BXK1 252 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 SMOC2Q9H3U7 446 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 MARCH2Q9P0N8 246 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 SFMBT1Q9UHJ3 866 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 CPQQ9Y646 472 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 C2CD4BA6NLJ0 364 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 ANHXE9PGG2 379 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 CYP1A2P05177 515 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 TCF3P15923 654 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 VIPR2P41587 438 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 RPL7AP62424 266 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 TANGO2Q6ICL3 276 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 MTSS1LQ765P7 747 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 CELF5Q8N6W0 485 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 EMC1Q8N766 993 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 ST13P5Q8NFI4 369 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 CTNNBL1Q8WYA6 563 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 NT5C3BQ969T7 300 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 ARHGEF26Q96DR7 871 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 ZFP14Q9HCL3 533 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 MRPL47Q9HD33 250 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 GKN1Q9NS71 199 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 SMPD4Q9NXE4 827 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 OBP2AQ9NY56 170 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 RRN3Q9NYV6 651 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 MYO1AQ9UBC5 1043 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 RASAL2Q9UJF2 1139 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 INTUQ9ULD6 942 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 SCINQ9Y6U3 715 aa17.36■□□□□ 0.37
CHCHD3-201ENST00000262570 ARHGAP6O43182 974 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 IGLV3-25P01717 112 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 TMEM253P0C7T8 217 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 MAGEA1P43355 309 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 PITX1P78337 314 aaPredicted RBP17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 COG7P83436 770 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 CCZ1BP86790 482 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 CCZ1P86791 482 aaPredicted RBP17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 CCDC173Q0VFZ6 552 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 EIF4EBP2Q13542 120 aaPredicted RBP17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 HTR4Q13639 388 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 DCUN1D2Q6PH85 259 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 E2F7Q96AV8 911 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 ELSPBP1Q96BH3 223 aa17.35■□□□□ 0.37
CHCHD3-201ENST00000262570 RSPRY1Q96DX4 576 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms