RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ATXN1P54253 815 aaKnown RBP28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 GNG11P61952 73 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 CCDC14Q49A88 953 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 MICALL1Q8N3F8 863 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 RNF10Q8N5U6 811 aaKnown RBP28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 IRGQQ8WZA9 623 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 ZNF512Q96ME7 567 aaPredicted RBP28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 MTCH2Q9Y6C9 303 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 SYNJ2BP-COX16A0A087WUM0 186 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 GJA1P17302 382 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 GPD1P21695 349 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 TMEM150AQ86TG1 271 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 SCML4Q8N228 414 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 SLC2A13Q96QE2 648 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 COX16Q9P0S2 106 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 C5orf42Q9H799 3197 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 CCDC195A0A1B0GUA6 201 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 CAPN9O14815 690 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 MDM4O15151 490 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 KIF5CO60282 957 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 DAB1O75553 588 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 TBX18O95935 607 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 ACTN2P35609 894 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 SCNN1AP37088 669 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 GYS2P54840 703 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 HADHBP55084 474 aaKnown RBP28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 NTHL1P78549 312 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 TMC5Q6UXY8 1006 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 MON1AQ86VX9 555 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 ARFGAP1Q8N6T3 406 aa28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.71■■■□□ 2.19
SMARCD3-201ENST00000262188 NCK2O43639 380 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 OTUD1Q5VV17 481 aaPredicted RBP28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 BTBD8Q5XKL5 378 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 TMC8Q8IU68 726 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 MYRFLQ96LU7 910 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 SLITRK1Q96PX8 696 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 TBCBQ99426 244 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 LRRC3Q9BY71 257 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 CCSER2Q9H7U1 834 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 IL21Q9HBE4 155 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 LCMT1Q9UIC8 334 aa28.7■■■□□ 2.19
SMARCD3-201ENST00000262188 SPTBN5Q9NRC6 3674 aaKnown RBP28.7■■■□□ 2.18
SMARCD3-201ENST00000262188 SART1O43290 800 aaKnown RBP28.7■■■□□ 2.18
SMARCD3-201ENST00000262188 MATKP42679 507 aa28.7■■■□□ 2.18
SMARCD3-201ENST00000262188 ZNF707Q96C28 371 aaPredicted RBP28.7■■■□□ 2.18
SMARCD3-201ENST00000262188 DNMT3BQ9UBC3 853 aaKnown RBP28.7■■■□□ 2.18
SMARCD3-201ENST00000262188 ALG6Q9Y672 507 aa28.7■■■□□ 2.18
SMARCD3-201ENST00000262188 TMEM265A0A087WTH1 108 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 MYL4P12829 197 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 COMTP21964 271 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 CCR2P41597 374 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 DNA2P51530 1060 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 ZNF143P52747 638 aaPredicted RBP28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 GAREM2Q75VX8 874 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 ITIH5Q86UX2 942 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 GPATCH11Q8N954 259 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 GOLGA1Q92805 767 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 DDX23Q9BUQ8 820 aaKnown RBP28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 ASNSD1Q9NWL6 643 aa28.69■■■□□ 2.18
SMARCD3-201ENST00000262188 ENC1O14682 589 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 PROSCO94903 275 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 SDC4P31431 198 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 SULT1E1P49888 294 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 ELMOD1Q8N336 334 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 TRMT2BQ96GJ1 504 aaKnown RBP28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 CEP295NLQ96MC4 621 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 TLR8Q9NR97 1041 aaKnown RBP28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 IP6K2Q9UHH9 426 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 SFMBT1Q9UHJ3 866 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 GLI1P08151 1106 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 ZDHHC11BP0C7U3 371 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 RARGP13631 454 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 GABRR2P28476 465 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 CYP4F8P98187 520 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 PPP2R3CQ969Q6 453 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 TCEAL4Q96EI5 215 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 COMMD8Q9NX08 183 aa28.68■■■□□ 2.18
SMARCD3-201ENST00000262188 C2orf78A6NCI8 922 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 ZNF840PA6NDX5 716 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 F11P03951 625 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 NOS2P35228 1153 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 EP400NLQ6ZTU2 488 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 GRASPQ7Z6J2 395 aaPredicted RBP28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 FAM172AQ8WUF8 416 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 CASP10Q92851 521 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 CDCA3Q99618 268 aaPredicted RBP28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 ABCC13Q9NSE7 274 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 ASB3Q9Y575 518 aa28.67■■■□□ 2.18
SMARCD3-201ENST00000262188 MSI1O43347 362 aaKnown RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 SSR1P43307 286 aaKnown RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 TAS2R40P59535 323 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 DLX2Q07687 328 aaPredicted RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 NME3Q13232 169 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 IFI16Q16666 785 aaKnown RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 RARS2Q5T160 578 aaKnown RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 STXBP5Q5T5C0 1151 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 SLFN11Q7Z7L1 901 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 TAC4Q86UU9 113 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms